Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03922 ATGGTGAACCTTTTCTGGGTTTGCATTGTTATTGGATTTGTTTTCATCAACTGGGTTCATGCTTATCACATCAATGAAACTGAACTCTCTATCTTAGAAGCTCATGAAGCTTCTTTTTCATTTGCTGTGGCTCAGCCTCATATGGTTGGAATCACCCTTATTCAATCTGCTGCTGCTAAAGGAGCTGTCTGCTTGGATGGAACATTGCCTGCTTATCATTTTGATCGCGGATACGGATCAGGAGCAAACAGCTGGCTCGTTAATTTAGAGGGTGGTGGATGGTGTAATAATGTTAGAACATGCGTTTATCGCAAGACAACACGGCGTGGATCATCAAAATTCATGGAAAAAGCGTTACCTTTTACGGGAATATTAAGCAATAATCCTCAAGAGAATCCAGATTTTTTTAACTGGAATAGAGTGAAAATTCGTTACTGTGACGGTGCCTCTTTTACCGGGGATAGCGAAGATAGGGCTGCACAATTGCAATTCAGAGGACAACGGATTTGGTTGGCTGCAATTGAGGAATTGATGTCAAAAGGAATGCGTTTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCAGCCGGTGGTTTGGCTACTATTTTACACTGCGATGAATTTCGAGGTCTATTCCCGGGGACTACCAAAGTGAAGTGTCTTAGTGATGCTGGCTTATTTCTTAATGCTGTTGATGTAGCTGGTGGACATACCCTCAGGAGTTTTTTCAACGGTGTTGTAACGCTACAGGGAGTGCAGAAGAATCTTCCACGGAGTTGTACTAATCATCTTGATCCCACCTCGTGCTTCTTTCCTGAGAATTTGATTGCCAGTATCAGAACTCCGCTATTCATTCTTAATACTGCCTATGATTCATGGCAGATCCAGTCAAGCTTAGCTCCTCCATCGGACGATCCTCACGGCTATTGGCACGATTGCAGATTAAACCATGCTAAATGTACCGGTTCACAAATCCAATTTCTGCAAGGATTCAGGAATCACATGCTGAATGTTGTTAGAGGCTTCTCAAGATCAAATCAAAATGGATTGTTCATAAATTCATGCTTTGCTCACTGCCAATCTGAGAGACAAGACACATGGTTTGCTGACAACTCTCCTGTCATTGGGAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTTAACCGAGCCGCTGTTAAGGACATTGATTGTCCTTACCCTTGTGATAACACATGCCACCATCTAGTTTTCAGATGA 1239 0.4294 MVNLFWVCIVIGFVFINWVHAYHINETELSILEAHEASFSFAVAQPHMVGITLIQSAAAKGAVCLDGTLPAYHFDRGYGSGANSWLVNLEGGGWCNNVRTCVYRKTTRRGSSKFMEKALPFTGILSNNPQENPDFFNWNRVKIRYCDGASFTGDSEDRAAQLQFRGQRIWLAAIEELMSKGMRFAKQALLSGCSAGGLATILHCDEFRGLFPGTTKVKCLSDAGLFLNAVDVAGGHTLRSFFNGVVTLQGVQKNLPRSCTNHLDPTSCFFPENLIASIRTPLFILNTAYDSWQIQSSLAPPSDDPHGYWHDCRLNHAKCTGSQIQFLQGFRNHMLNVVRGFSRSNQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFNRAAVKDIDCPYPCDNTCHHLVFR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03922 412 PANTHER NOTUM-RELATED 40 408 IPR004963 GO:0016787
Trre10g03922 412 Pfam Pectinacetylesterase 44 391 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03922 Trre-Chr10 48519271 48522809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03922 1 412 Carbohydrate Esterase AT1G57590 65.707 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03922 K19882 - gmx:100788448 721.465