Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03874 ATGGGGAAAAACATCGTTCCAGTGAAATCTGTTGTGTATGCTCTTTCTCCTTTCCAGCAGAAAATCATGTCCGGTTTGTGGAAGGATTTACCTACCAAAATTCATCACAAGGTTTCTGAAAATTGGATCAGCGCTCTTCTTTTGGTTACTCCCGTCGTCGGAACCTACTCGTATGCTATGCACTATGTGGAACAGGAGAAGCTGCACCACAGGTACTGA 219 0.4429 MGKNIVPVKSVVYALSPFQQKIMSGLWKDLPTKIHHKVSENWISALLLVTPVVGTYSYAMHYVEQEKLHHRY 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03874 72 Pfam Cytochrome b-c1 complex subunit 8 1 72 IPR020101 GO:0005750|GO:0070469
Trre10g03874 72 SUPERFAMILY Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 11 65 IPR036642 GO:0005750|GO:0006122
Trre10g03874 72 Gene3D - 4 72 IPR036642 GO:0005750|GO:0006122
Trre10g03874 72 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT 8 1 72 IPR020101 GO:0005750|GO:0070469
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03874 Trre-Chr10 48093442 48095378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03874 1 72 Chloroplast and Mitochondria Gene Families AT5G05370 77.778 2.18e-38 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03874 - - gmx:100500582 127.102