Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre10g03862 | ATGGCAGATGAAACACCAAATGATTTGAAGGAGGAGGTTCCTGATATTGCACCATTTGATCCTACTAAGAAGAAGAAAAAGAAGAAAGTTACAGTTATAGATCCTGCAGATGATGAATCAGTGGATAAATTGACCGAGAAGACAGAAAATCTTTCAGTTTCTGATGGGATTGATACTGCATTTGCTGGTTTGAAAAAGAAGAAGAAGAAGCCTGTTGAAATCAGTAACTTAAATGAGGAGAGTGGAGATGCAGTTGAAGATTTCGATGATCATGCCGAAGATGATGATGAAGAAGAAGCGGTTGCTTTGCAGCCTCGTTATCCTTGGGAAGGGAGTGACCGTGATTATCAATATGAGGAGCTTGTTGGCAGGGTGTTTAATATTCTACGTGAAAATAATCCAGAACTTGCTGGAGATCCGCAAAGGACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACCGTGTTTGTGAATTTTATGGATCTGTGCAAAACGATGCATCGACAGCCGGAACATGTTATGACTTTCTTGCTTGCTGAACTGGGTACTAATGGCTCCCTAGATGGACAACAAAGATTGGTTGTAAAGGGAAGATTTGCACCAAAGAATTTTGAAGGAATTCTGCGACGATATGTCAATGAATACGTTATTTGTCTTGGATGCAAGAGTCCAGACACACTACTTACAAAGGAGAATCGTCTATTCTTTCTCCGGTGTGAGAAGTGTGGATCAGGAAGATCGGTTGCTCCAATCAAAGCTGGTTTTGTTGCTCGTGTTGGCCGAAGGAATGCAGGGGGAACATGA | 816 | 0.4179 | MADETPNDLKEEVPDIAPFDPTKKKKKKKVTVIDPADDESVDKLTEKTENLSVSDGIDTAFAGLKKKKKKPVEISNLNEESGDAVEDFDDHAEDDDEEEAVALQPRYPWEGSDRDYQYEELVGRVFNILRENNPELAGDPQRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPEHVMTFLLAELGTNGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTLLTKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGGT | 271 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre10g03862 | 271 | Gene3D | - | 113 | 255 | - | - | |
Trre10g03862 | 271 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 219 | 254 | IPR016190 | GO:0003743|GO:0006413 | |
Trre10g03862 | 271 | MobiDBLite | consensus disorder prediction | 66 | 93 | - | - | |
Trre10g03862 | 271 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Trre10g03862 | 271 | FunFam | Eukaryotic translation initiation factor 2 subunit | 113 | 255 | - | - | |
Trre10g03862 | 271 | SMART | eIF2Bneu4 | 140 | 249 | IPR002735 | GO:0003743|GO:0006413 | |
Trre10g03862 | 271 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Trre10g03862 | 271 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 119 | 269 | IPR045196 | GO:0003743|GO:0006413 | |
Trre10g03862 | 271 | Pfam | Domain found in IF2B/IF5 | 141 | 248 | IPR002735 | GO:0003743|GO:0006413 | |
Trre10g03862 | 271 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 115 | 222 | IPR016189 | GO:0003743|GO:0006413 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre10g03862 | Trre-Chr10 | 47965395 | 47967894 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre10g03862 | 1 | 266 | Eukaryotic Initiation Factors Gene Family | AT5G20920 | 74.532 | 6.05e-138 | 387 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre10g03862 | K03238 | - | gmx:100783618 | 451.825 |