Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03862 ATGGCAGATGAAACACCAAATGATTTGAAGGAGGAGGTTCCTGATATTGCACCATTTGATCCTACTAAGAAGAAGAAAAAGAAGAAAGTTACAGTTATAGATCCTGCAGATGATGAATCAGTGGATAAATTGACCGAGAAGACAGAAAATCTTTCAGTTTCTGATGGGATTGATACTGCATTTGCTGGTTTGAAAAAGAAGAAGAAGAAGCCTGTTGAAATCAGTAACTTAAATGAGGAGAGTGGAGATGCAGTTGAAGATTTCGATGATCATGCCGAAGATGATGATGAAGAAGAAGCGGTTGCTTTGCAGCCTCGTTATCCTTGGGAAGGGAGTGACCGTGATTATCAATATGAGGAGCTTGTTGGCAGGGTGTTTAATATTCTACGTGAAAATAATCCAGAACTTGCTGGAGATCCGCAAAGGACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACCGTGTTTGTGAATTTTATGGATCTGTGCAAAACGATGCATCGACAGCCGGAACATGTTATGACTTTCTTGCTTGCTGAACTGGGTACTAATGGCTCCCTAGATGGACAACAAAGATTGGTTGTAAAGGGAAGATTTGCACCAAAGAATTTTGAAGGAATTCTGCGACGATATGTCAATGAATACGTTATTTGTCTTGGATGCAAGAGTCCAGACACACTACTTACAAAGGAGAATCGTCTATTCTTTCTCCGGTGTGAGAAGTGTGGATCAGGAAGATCGGTTGCTCCAATCAAAGCTGGTTTTGTTGCTCGTGTTGGCCGAAGGAATGCAGGGGGAACATGA 816 0.4179 MADETPNDLKEEVPDIAPFDPTKKKKKKKVTVIDPADDESVDKLTEKTENLSVSDGIDTAFAGLKKKKKKPVEISNLNEESGDAVEDFDDHAEDDDEEEAVALQPRYPWEGSDRDYQYEELVGRVFNILRENNPELAGDPQRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPEHVMTFLLAELGTNGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTLLTKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGGT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03862 271 Gene3D - 113 255 - -
Trre10g03862 271 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 219 254 IPR016190 GO:0003743|GO:0006413
Trre10g03862 271 MobiDBLite consensus disorder prediction 66 93 - -
Trre10g03862 271 MobiDBLite consensus disorder prediction 1 22 - -
Trre10g03862 271 FunFam Eukaryotic translation initiation factor 2 subunit 113 255 - -
Trre10g03862 271 SMART eIF2Bneu4 140 249 IPR002735 GO:0003743|GO:0006413
Trre10g03862 271 MobiDBLite consensus disorder prediction 1 39 - -
Trre10g03862 271 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 119 269 IPR045196 GO:0003743|GO:0006413
Trre10g03862 271 Pfam Domain found in IF2B/IF5 141 248 IPR002735 GO:0003743|GO:0006413
Trre10g03862 271 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 115 222 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03862 Trre-Chr10 47965395 47967894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03862 1 266 Eukaryotic Initiation Factors Gene Family AT5G20920 74.532 6.05e-138 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03862 K03238 - gmx:100783618 451.825