Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03857 ATGGCAAAGCACATCTCAAACTTTTCTCATTTCTTTGTCATTCTAGTTCTAGTTGTAGCTTGTTGGAATATGGGGATACCACAAGTGTTAGGAGATACAAAAGCATGTACAACACCTTTGGGAGCATGTGGTCCACGTGGAAATTGTGACCAAAGATGCAAATCTATGCATAGTGATGGTGAAGGGTCATGTGACTTAGGCCTATGTACTTGTGTTTATGGGTGCTATACTCCTCCAACTCCAGTTGAACCAAAACTTTGCACTATTGGTCTTGGATTATGTACTACTCCAAATGAATGCAATCAAAAATGTGCTAGTAATTACAATCATGGTCAAGGGAGTTGTGACTATTTAGGCACAGTAAATCTTTGCAATTGCATATATCATTGTTAG 393 0.3868 MAKHISNFSHFFVILVLVVACWNMGIPQVLGDTKACTTPLGACGPRGNCDQRCKSMHSDGEGSCDLGLCTCVYGCYTPPTPVEPKLCTIGLGLCTTPNECNQKCASNYNHGQGSCDYLGTVNLCNCIYHC 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03857 130 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Trre10g03857 130 PANTHER DEFENSIN-LIKE PROTEIN 183 1 130 IPR039641 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03857 Trre-Chr10 47914890 47915396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03857 9 130 Plant Defensins Gene Families AT4G30070 37.405 1.81e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03857 - K18033 gsj:114386687 149.058