Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03841 ATGATACCAAATGCATGGTTTTATAAGCTTAAAGATATGAGCAAATCATCAAGGAAAAGAAATGGTTCACAATCTCATCATGTTATGAAGAACAAAGTAATGACTTCACCAACAACTTCTCAAAGGTCACAATATTCAAGTTGTAGAGTTAGCTCTTCAACTAATGATATAATCATAGACATGAACAATGAATCTTTTCAAGGAAATTCTAAAAATTTAGATGGTTTTGATGCATTTTCACAACATGGTTTAGCTCCAATATTGACAAAGCAAGTGAAGTTTGATGATAAGAAGATCGAATCTCGAAGTATTAAGCTTAGAGTGAATTCTCCAAAACTTGTTAACAAAAAAATTCAAGCTTATGGAAGAAAGAGTGTTTCATCATCATTATCAAGTGGAAGCAAAGTTTCAAGGAATGATGGAGGGTTTGTAGATGGATTTGCAGTTGTTAAATCTTCAATTGATCCAATAAGTGATTTTAAGGAATCAATGGTGGAGATGATTGTGGAGAATAATATAAGAGGATCAAAGGATTTGGAAAATTTACTTGCTTGTTATCTTTCTCTTAATTCAAGTGAATATCATGATGTAATTGTTAAAGCTTTTGAGCAAATTTGGTATGATATGGCTCAACTTAGAATGTAA 645 0.3116 MIPNAWFYKLKDMSKSSRKRNGSQSHHVMKNKVMTSPTTSQRSQYSSCRVSSSTNDIIIDMNNESFQGNSKNLDGFDAFSQHGLAPILTKQVKFDDKKIESRSIKLRVNSPKLVNKKIQAYGRKSVSSSLSSGSKVSRNDGGFVDGFAVVKSSIDPISDFKESMVEMIVENNIRGSKDLENLLACYLSLNSSEYHDVIVKAFEQIWYDMAQLRM 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03841 214 ProSiteProfiles OVATE domain profile. 149 208 IPR006458 -
Trre10g03841 214 Pfam DNA-binding domain 1 33 IPR025830 GO:0003677
Trre10g03841 214 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 27 209 IPR038933 GO:0045892
Trre10g03841 214 MobiDBLite consensus disorder prediction 27 47 - -
Trre10g03841 214 Pfam Transcriptional repressor, ovate 153 209 IPR006458 -
Trre10g03841 214 NCBIfam uncharacterized plant-specific domain TIGR01568 147 209 IPR006458 -
Trre10g03841 214 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03841 Trre-Chr10 47717466 47718569 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre10g03841 Ovate 3.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03841 - - cam:101489571 229.95