Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03821 ATGACACTCATACTCATCCAAATTCAGAGATGGCTGATGCATACAAAGGTATGGAGATTTGTTGGCTTTGCTTCAGCTGTTGTTGGACTTGTTTGTTATGCTCTAAGCTCTTCCTTCAACCATCTATTTGGAAACTGGACTTTGTTGAAGATAATTCTTTACACTGTTTTCAGTTTCATCATCTGCCTCATGATTTTGTATACAAATATATGGAACCACTCGAGAAGTCTTCGGTTCAAAGCTCATACAGCATTTTTGGTATTGACAATCACCTCTGTCTATTCCTTTTACTTCGATAAAGTGATGAATGGAAAATCAGATGTATATAGCTTAATTTCATGTGCTGCCTTTGCTATCATGTCACTGAGTTTGTCGCGGCAAACTCAGTGCGGATTTGAAGTGGATCTTCTTTACTTTTTCCTTGGATGTCTAACTGTGTTCCTCATGAAGGTTAAATTGCAGTTATTCATTATTGGAGCAGGTTTGAGTTATTCCCTTATCATTCTTCGTTCTTTCTTTTCTTTTACACAAGATATTGGATACTCCAAACTTGAACATGAAAGTTCAGTAATTATTGAAGTCAATTCGCTACAACAACTAGTCAGTACTGATATTGCTAGTACAATGGAACAATTAAGGTCTTATCTTAACACTCTCCAGCAGAAAAATTTGAATCTTGTCGATATACTGTTGAAGCATGTGAATGAATATGGTGACTCTGAATTGATGTCGTTCGGCCCCAACTTCATGATCGATGAGTTGCAGCCTGAATTGATCAACTGCCTTCATGAAACCGCGAAGTTGATGGTGCGCGCTGGATTTGAGGAAGAGTTTTCTAATGTATACATCAATTGTAGAAGGAAATGTTTGGAAGAGTGTCTAATAAAAAGATTATTTGGCTTTCAGAAGATTAATCTAAAAAATGAACATCAAAGGGTGAGATATGTAGATACGGTGATTAAAAGGTGGATCACAGCATCCGAAATTGCTCTTAAGATTCTATTTCCCTTTGAACAACGACTCTGTGATCATGTCTTTTCAGGTTTCACCTCCTCCGCTACTCGTTGTTTCACTGAGGTTTTCCACGGAACAACATTTCAGCTTCTGACTTTCGCTGATGAAGTTGCTCATGGAAGCCCTTCAATTTGGCGTTTATTCAAAATGCTCGCAATCTATGAGACATTGCATTATCTGATACCGAAATTCCAATTATGTCCTGACTCATTGGTGAATGGTGCAGCAGTTACAGTCCAAAACAGATTAGGCATAGCAATCAGTGATCTTTTCATGAAACTGAATTATCTGATTTTTCGTGTCCCGGCAGCCAAGAAAGTTGGTTCGTCTGATGGCCGAGTTCATCCATTGACGGTCCAGATAATTAGTTACCTCGCTTCTTCTTGTAGGTCACGTCATATGCTAGAACAAATTTTGCAGGAATATCCCAAGGTGAATAATGGAGTAGTAGTGAAAGTTTCTTTTATAGCACACATGGAGTGGATATTGGATATACTAGAGAAAAGATTGAAAGCCAAGTCCAAAGACTACAAAGACCCTGCTTTGGGCTATCTTTTCATGATGAATAATAGGAGTCACATAGAAGCTATAATAAAAAGTTGGGATTTAGAAACTGTTTTCGGCGATGATTGGTTCCGAAAAAATCAAGTGAAATTTCAACGGGACCTTGAGCTTTATCAAAGAAACACATGGAATAAGGTGTTGGAGTTTTTGAAGTTGGACAACAATGACTATCTAACACCTAATGATAATGTTACAGCAGAGTTATTGAAAGAGAAGCTAAAATTGTTCAACAAGTATTTTGATGAGATGTATAGAATTCAGTCTGCTTGGTCTGTTTATGATAAGAAGCTGAAAGAAGAAATAATAATATCAGTGGGAAATACTTTGTTGCCTGTATATGGAATCTTCATTGGGAGGTTCCGGGATTGTCTTGGTGTTCATGCTAATAAGTATATTCAATATGGAATATTTGAGATTCAAGATCGACTCAACAATTTGTTTCTGGAAAAAAAGAAGAGATGA 2040 0.3716 MTLILIQIQRWLMHTKVWRFVGFASAVVGLVCYALSSSFNHLFGNWTLLKIILYTVFSFIICLMILYTNIWNHSRSLRFKAHTAFLVLTITSVYSFYFDKVMNGKSDVYSLISCAAFAIMSLSLSRQTQCGFEVDLLYFFLGCLTVFLMKVKLQLFIIGAGLSYSLIILRSFFSFTQDIGYSKLEHESSVIIEVNSLQQLVSTDIASTMEQLRSYLNTLQQKNLNLVDILLKHVNEYGDSELMSFGPNFMIDELQPELINCLHETAKLMVRAGFEEEFSNVYINCRRKCLEECLIKRLFGFQKINLKNEHQRVRYVDTVIKRWITASEIALKILFPFEQRLCDHVFSGFTSSATRCFTEVFHGTTFQLLTFADEVAHGSPSIWRLFKMLAIYETLHYLIPKFQLCPDSLVNGAAVTVQNRLGIAISDLFMKLNYLIFRVPAAKKVGSSDGRVHPLTVQIISYLASSCRSRHMLEQILQEYPKVNNGVVVKVSFIAHMEWILDILEKRLKAKSKDYKDPALGYLFMMNNRSHIEAIIKSWDLETVFGDDWFRKNQVKFQRDLELYQRNTWNKVLEFLKLDNNDYLTPNDNVTAELLKEKLKLFNKYFDEMYRIQSAWSVYDKKLKEEIIISVGNTLLPVYGIFIGRFRDCLGVHANKYIQYGIFEIQDRLNNLFLEKKKR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03821 679 PANTHER EXOCYST COMPLEX PROTEIN EXO70 184 673 IPR004140 GO:0000145|GO:0006887
Trre10g03821 679 Pfam Exo70 exocyst complex subunit 321 670 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre10g03821 679 SUPERFAMILY Cullin repeat-like 207 673 IPR016159 -
Trre10g03821 679 Gene3D Exocyst complex component Exo70 181 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03821 Trre-Chr10 47488478 47490517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03821 248 673 EXO70 exocyst subunit family AT5G58430 45.309 3.18e-109 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03821 - - mtr:25490887 660.988