Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03817 ATGGCAAAGGCCCTTGCTAAATCATTTCCAAAAATGGAGTGCTATGTATTTGATCTCCCACATGATAACCTAAACTATGTTGGTGGAGACATGTTCAAGAAGATTCCTCCAACTGAAGCTATTTTGTTGAAGTGGATACTGCATGATTGGAATGATGAGGAATGCGTAAAGATATTAAAGAATTGTAAAGATGCAATAGCAAAGAAAGGTAAATCGAAACACAACTCTTCTATGATATGTTAA 243 0.3539 MAKALAKSFPKMECYVFDLPHDNLNYVGGDMFKKIPPTEAILLKWILHDWNDEECVKILKNCKDAIAKKGKSKHNSSMIC 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03817 80 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 80 IPR016461 GO:0008168
Trre10g03817 80 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 71 IPR029063 -
Trre10g03817 80 Pfam O-methyltransferase domain 2 71 IPR001077 GO:0008171
Trre10g03817 80 Gene3D Vaccinia Virus protein VP39 2 71 IPR029063 -
Trre10g03817 80 PANTHER O-METHYLTRANSFERASE 2 71 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03817 Trre-Chr10 47464872 47465909 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03817 1 71 Monolignol Biosynthesis Gene Families AT1G51990 49.367 4.69e-21 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03817 - - vra:106764465 121.324