Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03815 ATGAGTGTGACACCCTTTTTGCAAGCAGTACTCCATCCAATTTTGGCGAACCCATGGCATGAATTGTCTGCTTGGTTAAAAACCGATGATCCTACAACATTTGAAACTGCACATGGAATGTTGATATGGGATTATGCGGCTCGTGAGCCTAACTTTAACAACTTATTCAATGATGCAATGGCGAGTGATGCTCGATTGGTTACTAGTGTGGTGATTGAGAAATGCACTGGAGTGTTCAACGGTTTGGACTCATTGGTTGATGTTGGAGGAGGCACCGGGACCATGGCAAAGGCACTTGCTAAATCATTCCCAAAAATGGAGTGTACTGTGTTTGATCTTCCACATGTTGTCGATGGCTTGCAAGGAAGTGATAACTTAAACTACGTTGGTGGAGACATGTTTAAGAAAATTCCTCCAGCTGATGCGATTTTGTTGAAGTGGATATTACATGATTGGAATGATGACGAATGTGTAAGGATATTAAAAAATTGTAAGGATGCAATAGCGAAGAAAGGTAAACAAGGGAAGGTTATTATCATCGATATGGTGGTGGAGAAGGGGAATGGTGAATCAGTTGAAACACAACTCTTCTTTGATATGCTCATGATGGTGTTGGCCTCCGGAAAAGAAAGGACCGAGAAAGAATGGATTAAGTTGATTTCTTCGGCCGGTTTCAGTGACTACAAGATAACTCCAATTTTAGGCCTAAGATCTCTCATTGAAATTTATCCTTAA 735 0.4095 MSVTPFLQAVLHPILANPWHELSAWLKTDDPTTFETAHGMLIWDYAAREPNFNNLFNDAMASDARLVTSVVIEKCTGVFNGLDSLVDVGGGTGTMAKALAKSFPKMECTVFDLPHVVDGLQGSDNLNYVGGDMFKKIPPADAILLKWILHDWNDDECVRILKNCKDAIAKKGKQGKVIIIDMVVEKGNGESVETQLFFDMLMMVLASGKERTEKEWIKLISSAGFSDYKITPILGLRSLIEIYP 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03815 244 Gene3D Vaccinia Virus protein VP39 1 244 IPR029063 -
Trre10g03815 244 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 244 IPR016461 GO:0008168
Trre10g03815 244 PANTHER O-METHYLTRANSFERASE 20 229 IPR016461 GO:0008168
Trre10g03815 244 FunFam O-methyltransferase ZRP4 1 244 - -
Trre10g03815 244 Pfam O-methyltransferase domain 19 226 IPR001077 GO:0008171
Trre10g03815 244 CDD AdoMet_MTases 85 173 - -
Trre10g03815 244 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 242 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03815 Trre-Chr10 47459526 47460341 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03815 2 244 Monolignol Biosynthesis Gene Families AT1G51990 36.145 3.84e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03815 - K16040 gmx:100781008 396.741