Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03810 ATGGAATCCCAAAATATAGAGCATGTTGCTTCTAATTTGCTCAAAGCTCAGAGCCACATATGGAATCATATTTTCAATTTCATAAATTCCATGTCACTTAAATGTGTAGTTGATTTAGGCATATCAGATATTATACACAATCATGGAAAACCCATGCCACTCTCAAAGCTCATTTCTTCACTATCAATCCATCCTACAAAGAACCACAACATTTATCGCTTGATGCGAATCATGACTCACTCTGGCTTCTTCTCGCAACACAATGTTACAGAGAATGAGTTAGAAATTGAGTATATGTTAACCGATGCATCTCGATTACTACTTAAGGACAATCCAATGAGTATGACACCATTCGTGCAAGCGATGCTTGATCCGGTTTTAACAAATCCGTGGCATCAATTGTCAACTTGGTTAAAAAATGATGATCCTACAACGTTTGAAACAACACACAAGATGCTATTGTGGGATTTTGCTGCCCGTGACTCGAATTTTAACAACTTATTCAATGAGTCTATGGCAAGTGATGCTCGATTAGTGACCAATTTGTTGATCGAGAAGTATAGGGGAATATTCATTGGATCAGATTCATTGATCGATGTTGGAGGAGGCACAGGGACTGCGGCAAAGGCTCTTGCGAAATCATTCCCTCAATTGGAGTGCACCGTGTTCGATCTCCCACATGTTGTTGCAGGCTTGCAAGGAAGTGATAATCTAAAATATGTTGGTGGAGATATGTTTAATGAAATTCCTCCGGCAGATGCGATCTTGATGAAGGTAAAATGTTACAATTTTATTTATGTGTATGATACTATAATATCATTGTTCACGTATGAGATATGTTAA 843 0.3796 MESQNIEHVASNLLKAQSHIWNHIFNFINSMSLKCVVDLGISDIIHNHGKPMPLSKLISSLSIHPTKNHNIYRLMRIMTHSGFFSQHNVTENELEIEYMLTDASRLLLKDNPMSMTPFVQAMLDPVLTNPWHQLSTWLKNDDPTTFETTHKMLLWDFAARDSNFNNLFNESMASDARLVTNLLIEKYRGIFIGSDSLIDVGGGTGTAAKALAKSFPQLECTVFDLPHVVAGLQGSDNLKYVGGDMFNEIPPADAILMKVKCYNFIYVYDTIISLFTYEIC 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03810 280 Gene3D Vaccinia Virus protein VP39 108 265 IPR029063 -
Trre10g03810 280 Gene3D - 2 107 IPR036388 -
Trre10g03810 280 Pfam O-methyltransferase domain 131 263 IPR001077 GO:0008171
Trre10g03810 280 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 280 IPR016461 GO:0008168
Trre10g03810 280 FunFam Coniferyl alcohol 9-O-methyltransferase 3 107 - -
Trre10g03810 280 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Trre10g03810 280 PANTHER O-METHYLTRANSFERASE 14 261 IPR016461 GO:0008168
Trre10g03810 280 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Trre10g03810 280 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 262 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03810 Trre-Chr10 47405422 47406264 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03810 31 264 Monolignol Biosynthesis Gene Families AT5G54160 30.290 2.47e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03810 - K16040 psat:127122247 403.675