Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03809 ATGGCAAAGGCACTTGCTAAATCATTCCCAAAAATGGAGTGCATTGTATTTGATCTCCCACATGTTGTTGTTGGCTTTCAAGGAAGTGAGAATCTAAAATATGTTGGTGTAGACATGTTTAAGGAAATTCCTCCAGCAGATGCCATTTTGTTGAAGTGGATATTGCATGACTGGAATGACGAGAAATGTGTGAAAATATTGAAGAAATGCAAGGAATCACTCAAACAAAAAGGAAAAGAAGGAAAGGTGATTATCATAGACATGGTGTTGGACATTGACATGAAGGGAGACAATGACATTACTAAATCAACTGAAACACAACTCTTCTTTGATATGCTAATGATGGTAGTGCTCACTGGAAAAGAGAGAAACCAAAAAGAATGGAGTATTTTGATTTACTCTGCAGGATTTAGTGGATATAAGATAACTCCAATTTTAGGCTTAAGGTCTATGATCGAGATCTATCCCTAA 471 0.3631 MAKALAKSFPKMECIVFDLPHVVVGFQGSENLKYVGVDMFKEIPPADAILLKWILHDWNDEKCVKILKKCKESLKQKGKEGKVIIIDMVLDIDMKGDNDITKSTETQLFFDMLMMVVLTGKERNQKEWSILIYSAGFSGYKITPILGLRSMIEIYP 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03809 156 PANTHER O-METHYLTRANSFERASE 2 141 IPR016461 GO:0008168
Trre10g03809 156 Pfam O-methyltransferase domain 2 138 IPR001077 GO:0008171
Trre10g03809 156 Gene3D Vaccinia Virus protein VP39 1 156 IPR029063 -
Trre10g03809 156 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 154 IPR029063 -
Trre10g03809 156 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 156 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03809 Trre-Chr10 47399248 47400279 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03809 1 156 Monolignol Biosynthesis Gene Families AT1G51990 42.767 2.17e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03809 - K16040 gmx:100807238 233.417