Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03807 ATGGAATCCCAAAATGGAGAGAATATTGCTGTCAATTTGCTCAAAGCTCAAAGTCACATATGGAATCACATTTTCAACTTCATAAATTCCATGTCACTTAAATGTGTAGTTGATTTAGGCATACCAGATGTCATACACAATTATGGCAAATCTATGCCACTCTCCAAACTAATTACTTCACTACCAATCCACCCTTCAAAAACTTGTTTCATCTATCGCTTGATGCGAATCATGACTCATTCTGGTTTTTTCTCTCAACAAAATGTTACAGAGAACGAGCTAGAAGTTGAGTACATGTTAACTGATGCATCAATATTACTACTTAAGGATACTCCAATGAGCATGACACCATTCGTGCAAGCAATGCTCGATCCAATTTTAACAAATCCGTGGAATCAGTTATCTACTTGGTTTAAAAGTGATGATCCTACAACATTTAAAACTGCACATGGGATATCGATATGGGATTATGCAGCAAATGAGCCGAACTTTAACAACTTATTCAATAATGCAATGGCAAGTGATGCTCAATTGGTCACTGATGGAATGTGA 552 0.3641 MESQNGENIAVNLLKAQSHIWNHIFNFINSMSLKCVVDLGIPDVIHNYGKSMPLSKLITSLPIHPSKTCFIYRLMRIMTHSGFFSQQNVTENELEVEYMLTDASILLLKDTPMSMTPFVQAMLDPILTNPWNQLSTWFKSDDPTTFKTAHGISIWDYAANEPNFNNLFNNAMASDAQLVTDGM 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03807 183 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Trre10g03807 183 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 181 IPR029063 -
Trre10g03807 183 Gene3D - 2 107 IPR036388 -
Trre10g03807 183 FunFam Coniferyl alcohol 9-O-methyltransferase 3 107 - -
Trre10g03807 183 Pfam O-methyltransferase domain 131 181 IPR001077 GO:0008171
Trre10g03807 183 Gene3D Vaccinia Virus protein VP39 108 183 IPR029063 -
Trre10g03807 183 SUPERFAMILY "Winged helix" DNA-binding domain 13 111 IPR036390 -
Trre10g03807 183 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 183 IPR016461 GO:0008168
Trre10g03807 183 PANTHER O-METHYLTRANSFERASE 14 181 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03807 Trre-Chr10 47393478 47394029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03807 31 173 Monolignol Biosynthesis Gene Families AT5G54160 24.490 1.83e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03807 - K16040 psat:127122247 285.804