Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03797 ATGAATGTTATTGCTACAAGCAATGACTTGAAATTGAGACCAAAATTCTCATCTATTTTAGTCTTTGGGGACTCAACAGTAGACACAGGAAATAACAACTACATTAAAACATTGTCCAAAGGAAATCATTTACCATATGGTAGGGATTTTCCTAATCATGTACCTATTGGTAGATTTTCTAATGGAAAATTGGCTATTGATTTTCTTGCATCTATAATGAATCTCAAAGACACTGTCCCTCCTTTTTTAGATCCAAATCTTTCAAATGAAGATCTTTTAACAGGTGTTAGTTTTGCATCTGGAGGATCGGGTTTTGATGATTTGACAATAGCTTTATCGGGCGCTGTATCAATTTCCAAACAAATTGAATATTTCAAAAATTATGTGGTAAAGGTTAAAAGCATTGTAGGGGAAAAAGAAGCTAAAAATAGACTTGGAAATGCTTTGGTGATTATTAGTGCTGGATCTAATGACTTCCTTTTCAATTTTTATGATATTCCAACAAGAAGGTTGGAGTTCAACATTAGTGGATACCAAGATTATATTCAAAGTAGACTTCAAATTTTCATTGAGGAACTATATGACCTTGGATGCAGAAAATTTGGTGTGACTGGGCTTCCTGCTATTGGTTGCATACCTGTTCAAATAACAGCTAAGTTTGTAAATTTAAAGGATCGGAAATGTGTGGAGGATGAAAATTTAGAAGCTAAAGTTTACAACCAAAAATTGGCACGGAGATTACTTAAATTACAACCAATGCTTCCAGGAAGCAGAATTATTTATACAAACATATATGATCCTTTGATTGGCCTTATCAATCATCCTCAAAAATATGGTTTTACGGAAACAAACAAAGGATGTTGTGGAACTGGCTTATTTGAAGTAACTCCATTGTGTAATGAACTCACACCAGTTTGTAATGACGCTTCAAGATATGTATTTTGGGATAGTGTACATCCAACTGAAGCAACCTACAAATATATTGCTAAGTACTTAGAATTGGAAGTCCTACCTAAGTTCCAATTTCATAGGGATTATATGTTTGATTGA 1050 0.3352 MNVIATSNDLKLRPKFSSILVFGDSTVDTGNNNYIKTLSKGNHLPYGRDFPNHVPIGRFSNGKLAIDFLASIMNLKDTVPPFLDPNLSNEDLLTGVSFASGGSGFDDLTIALSGAVSISKQIEYFKNYVVKVKSIVGEKEAKNRLGNALVIISAGSNDFLFNFYDIPTRRLEFNISGYQDYIQSRLQIFIEELYDLGCRKFGVTGLPAIGCIPVQITAKFVNLKDRKCVEDENLEAKVYNQKLARRLLKLQPMLPGSRIIYTNIYDPLIGLINHPQKYGFTETNKGCCGTGLFEVTPLCNELTPVCNDASRYVFWDSVHPTEATYKYIAKYLELEVLPKFQFHRDYMFD 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03797 349 FunFam GDSL esterase/lipase APG 9 335 - -
Trre10g03797 349 SUPERFAMILY SGNH hydrolase 18 335 - -
Trre10g03797 349 CDD SGNH_plant_lipase_like 18 332 IPR035669 -
Trre10g03797 349 Gene3D SGNH hydrolase 6 336 IPR036514 -
Trre10g03797 349 PANTHER GDSL ESTERASE/LIPASE EXL3 16 331 - -
Trre10g03797 349 Pfam GDSL-like Lipase/Acylhydrolase 19 332 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03797 Trre-Chr10 47261195 47265264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03797 16 336 Pollen Coat Proteome AT1G75910 33.951 3.27e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03797 - - gmx:100817270 571.237