Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03796 ATGGCTTATGCAATCCCCTTTATTATTTTAATGCAAACTTGCACCATTATGAATGTTATTGCTACAAGCAATGACTTGAAATTGAGACCAAAATTCTCATCTATTTTAGTCTTTGGGGACTCAACAGTAGACACAGGAAATAACAACTACATTAAAACATTGTCCAAAGGAAATCATTTACCATATGGTAGGGATTTTCCTAATCATGTACCTATTGGTAGATTTTCTAATGGAAAATTGGCTATTGATTTTCTTGCATCTATAATGAATCTCAAAGACACTGTCCCTCCTTTTTTAGATCCAAATCTTTCAAATGAAGATCTTTTAACAGGTGTTAGTTTTGCATCTGGAGGATCGGGTTTTGATGATTTGACAATAGCTTTATCGGGCGCTGTATCAATTTCCAAACAAATTGAATATTTCAAAAATTATGTGGTAAAGGTTAAAAGCATTGTAGGGGAAAAAGAAGCTAAAAATAGACTTGGAAATGCTTTGGTGATTATTAGTGCTGGATCTAATGACTTCCTTTTCAATTTTTATGATATTCCAACAAGAAGGTTGGAGTTCAACATTAGTGGATACCAAGATTATATTCAAAGTAGACTTCAAATTTTCATTGAGGAACTATATGACCTTGGATGCAGAAAATTTGGTGTGACTGGGCTTCCTGCTATTGGTTGCATACCTGTTCAAATAACAGCTAAGTTTGTAAATTTAAAGGATCGGAAATGTGTGGAGGATGAAAATTTAGAAGCTAAAGTTTACAACCAAAAATTGGCACGGAGATTACTTAAATTACAACCAATGCTTCCAGGAAGCAGAATTATTTATACAAACATATATGATCCTTTGATTGGCCTTATCAATCATCCTCAAAAATATGGTTTTACGGAAACAAACAAAGGATGTTGTGGAACTGGCTTATTTGAAGTAACTCCATTGTGTAATGAACTCACACCAGTTTGTAATGACGCTTCAAGATATGTATTTTGGGATAGTGTACATCCAACTGAAGCAACCTACAAATATATTGCTAAGTACTTAGAATTGGAAGTCCTACCTAAGTTCCAATTTCATAGGGATTATATGTTTGATTGA 1098 0.3352 MAYAIPFIILMQTCTIMNVIATSNDLKLRPKFSSILVFGDSTVDTGNNNYIKTLSKGNHLPYGRDFPNHVPIGRFSNGKLAIDFLASIMNLKDTVPPFLDPNLSNEDLLTGVSFASGGSGFDDLTIALSGAVSISKQIEYFKNYVVKVKSIVGEKEAKNRLGNALVIISAGSNDFLFNFYDIPTRRLEFNISGYQDYIQSRLQIFIEELYDLGCRKFGVTGLPAIGCIPVQITAKFVNLKDRKCVEDENLEAKVYNQKLARRLLKLQPMLPGSRIIYTNIYDPLIGLINHPQKYGFTETNKGCCGTGLFEVTPLCNELTPVCNDASRYVFWDSVHPTEATYKYIAKYLELEVLPKFQFHRDYMFD 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03796 365 Gene3D SGNH hydrolase 22 352 IPR036514 -
Trre10g03796 365 CDD SGNH_plant_lipase_like 34 348 IPR035669 -
Trre10g03796 365 FunFam GDSL esterase/lipase APG 24 351 - -
Trre10g03796 365 SUPERFAMILY SGNH hydrolase 34 351 - -
Trre10g03796 365 Pfam GDSL-like Lipase/Acylhydrolase 35 348 IPR001087 GO:0016788
Trre10g03796 365 PANTHER GDSL ESTERASE/LIPASE EXL3 19 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03796 Trre-Chr10 47261195 47265312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03796 32 352 Pollen Coat Proteome AT1G75910 33.951 3.85e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03796 - - gmx:100817270 587.415