Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03795 ATGCCCATAAGAATTCCTAATAGACTAATACAGAAAAATCTATGGAGAGTCTTAGGATTTTTTTCAAGTATCATTGGACTCATATCTTATGCATTAAGCTCTTCTTTCAATCAACTTTTTGGAAATTGGAACTTTATCAAAATCATTATCTACACAGTGGTAAGTATCAGTATCAGTAGCATGATGTTATTTTTGAAAAAATGGAAACTTTCAAGGAGATTCTTGTTAAGAGCTCATTTGGGTGTTATTGTTTTGTTGCTAACATCATTTTACAGTTTTGTATCTGATAATAAAACTTTAAATCAAAAACCAGACCTATTGAGTCTTATTTCTTGTGCATCTTTTGCTTTAATGTCTTTTTGTTTATCAAGACAGATTGATCTTGTTTTTGAATCTGATCTTCTCAATTTCTTCCTTGGAATGCTTACAATTCAATTGATGAAAATCAATTTGATGTTATCTATAGTTTCTGCAATCTTATGTTATTCAATTATGGTTCTTCGCTCGAAGTTAGATTCTCGACACGAAATAGGAACATTAAGAGTGGAAGATGATGTAGCTATAGAAATTGATGATGTAGATAGCAACAAAAATGAGTTCCAAACTGATTATGGTATCCAAAAAAAACATTCTTTAAGAAGAAGAATGAATAATGATGATGGTTATAATTGGAAAAGATATGAAGAAAAATTTGCAAAAGGTAGTGAAAATCAGAAAAGTTACTATAAATGTATGTGGCCTAATTGTTTTGTGAAGAAAAAAGTTGAGAGAAATATTGATGGTGAAATTATTGAGACATTATATAAAGGTACACATAATCATTGGATGCCTACTATGTCTACAATGAAGAAGAATTCATCATCTGAATATCTTTATTCACTCTTGCCTTCAGAAACTGCCTCTATTGATTTTCCAGATCAATCATTTGGCAGTGAACAATTGGATTCTGATGAAGAACTTGCAAAGTCCTCGGTATCAATATGA 984 0.3028 MPIRIPNRLIQKNLWRVLGFFSSIIGLISYALSSSFNQLFGNWNFIKIIIYTVVSISISSMMLFLKKWKLSRRFLLRAHLGVIVLLLTSFYSFVSDNKTLNQKPDLLSLISCASFALMSFCLSRQIDLVFESDLLNFFLGMLTIQLMKINLMLSIVSAILCYSIMVLRSKLDSRHEIGTLRVEDDVAIEIDDVDSNKNEFQTDYGIQKKHSLRRRMNNDDGYNWKRYEEKFAKGSENQKSYYKCMWPNCFVKKKVERNIDGEIIETLYKGTHNHWMPTMSTMKKNSSSEYLYSLLPSETASIDFPDQSFGSEQLDSDEELAKSSVSI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03795 327 Pfam WRKY DNA -binding domain 219 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre10g03795 327 SMART WRKY_cls 218 276 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre10g03795 327 Gene3D WRKY domain 202 278 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre10g03795 327 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 216 287 IPR044810 GO:0003700
Trre10g03795 327 ProSiteProfiles WRKY domain profile. 218 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre10g03795 327 SUPERFAMILY WRKY DNA-binding domain 216 277 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre10g03795 327 MobiDBLite consensus disorder prediction 303 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03795 Trre-Chr10 47259282 47260265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03795 213 315 WRKY Transcription Factor Family AT2G38470 43.966 6.79e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre10g03795 WRKY 9.1e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03795 - - ccaj:109792596 366.696