Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03792 ATGGAGCTGATAATGGAGAATTTTGAGAGAAATTTGGAAGCTAAGTCACAAATTTATGAGGACCCTACTTTGCGGTATTTTTTCATGCTGAATAATATAAGTCTGATTAAGTACAAATTGGAAACCTTTTGGGATGATAGGTTCTGTAAGAATACAAGGCAGTACTTGGAACTCTATTGTGAAAGTTCATGGAGTAAGGTTATAGATATTTTGAAAATGAGTATAAATGAGTCAGCGGCGTTCAATTCTGAAGCAGATTCGATGAAAGGCAAGCTCAATTTGTTCAATCAGAAGTTTAGGGAGATGTGTGGAATTTACTCTACAAGGCGTGTTTTTGATGAACAGCTTAGGAAACAAATAATAATTTATGTGGAAACTATGTTGTTGCCGTTTTATGAAAACTCCATTGCGAGGTTTGAGAATGTTCTTGGTAAAAATGCCGACGAGTATAGAATGTCTGATATTCAAACTCAACTCAATCATTTGTTTCTGGTACAGGATATTGATGTTGATTCTGTTAGAGGATCACTTAGGAATCAGTTAGTTAGTTAG 552 0.3496 MELIMENFERNLEAKSQIYEDPTLRYFFMLNNISLIKYKLETFWDDRFCKNTRQYLELYCESSWSKVIDILKMSINESAAFNSEADSMKGKLNLFNQKFREMCGIYSTRRVFDEQLRKQIIIYVETMLLPFYENSIARFENVLGKNADEYRMSDIQTQLNHLFLVQDIDVDSVRGSLRNQLVS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03792 183 Pfam Exo70 exocyst complex subunit 4 160 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre10g03792 183 SUPERFAMILY Cullin repeat-like 4 163 IPR016159 -
Trre10g03792 183 Gene3D Exocyst complex component Exo70 1 168 - -
Trre10g03792 183 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 163 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03792 Trre-Chr10 47252008 47252559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03792 1 163 EXO70 exocyst subunit family AT5G58430 38.983 1.29e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03792 - K07195 psat:127118474 216.853