Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03788 ATGAAGATTAACTATTTGTTGGCTATTATTGGAGTTTGTTATAGCTATTGTCTTATTATTCTTCGTTCTTCATTCTCTACTTTAAATGTTATACCGGAACCGCAGTGTCTTGAACTCGAAGAACAAAGAGTAGTCATTCAAGTTGATTTTCAGCAAGAAGATACTGATAGTGGTTGTATCAAGCAACACTCTCATACAAGTTTTGAACCGTTGTTGCAACAGTTTCAAACTTGTATGAAAGAGCTTGAGCAAAATAATTCCAACATTGCCAAGATGCTTATAGAAAATGTGAAAGGTAACTATAAATTGGTAGTGACTGACCACAACTTCATAACTGATGCGCTTCCTCATGAAACAATCAATAATATTCAAAACTCGGCGAAATTGATGGTGGATGCTGGTTTTGAGAAAGTGTGTTTTGAGGTTTACAATGGCTACCGTAAGGAATGGTTGGAAGACTTGTTAGGAAAGATGCGATTTCAAGATTACGTGATAGGAAAATGGATTAAAACTTCAGAGGTTGCTCTCAGAGTTTTATTTCCCAGTGAGCGTCGACTATACAATTGTGTCTTCTCGAATTCAATGTCTCCATCATCTGACCTCTATTTCACGGAGCTTTGTCGTGGATCGATCACTAAACTACTGAACTTTGCTGATTCATTTGCAAATCAAAGCCCTTCAGCATGGCGTTTGTTTAAAATCCTTGACTTGTTTGAGACTTTGTGTAATCTAATTCCTGAATTTGAATCGTTATTCATTGATTCGTTGGTGAATGAAGCAATAAAAGTCAAGAATAGATTGGGTGAAATAAGTAGAGACATTTTTATGGAATTCGGGAATCTGATATTCCTTACACCGGATGCGGAGTTTGATTGTTGGGCTGATGGTGGAGTTCATCCAATGACCAGCGCAGCCACTGGCTACATCGTTATGGCATTTTGGTCAAGACAAAACCTCGAGCAAATTTTACAACAATATCCCTTGGTTGATGATGATAGAGCGGAGACATCTTTATTCTATTCGCAGATGGTGTTGATAATGGAGCAGTTTGAGAGCAAATTGGAAGCTAAGTCACAAATTTATGGGGACCCTGCGTTGCGCTATTTTTTTATGATGAATAATCTAGGGCACGTTACATACAGATTGGAAACCTTTTGGGATCATAGGTTCGGTACAAATGTGGAGCAATACTTTGAACTCTATTGTAGGAACTCTTGGAATATGGTGATAAATGTTTTGAAGATGGATATGAATGAGTCAGTGGCACCTAATTCTGAAACAGATTCAATGAAAGATAAGCTCAATATTTTCAACCAGAAGTTTAGGGAGATGTGTGGTATTCAATCTACATGGCGTGTTCTTAATGAGCAAGTAAGAAACTTCATAATAACTTCCATAGAAAGCATTTTGTTGCCAGCTTATGAAAACTTCATTGGTATGTATCATAATACTGTTGGTAAAAATGTTGATGAGTATATCGAGTATGGAATATTTGACATTAAAAATCATCTCAGTCGTTCATTTATATTACAGGATGTTGATTCTGTGAAAGGATTAGATGAAAATCAGTTAGTTAGTTAG 1581 0.365 MKINYLLAIIGVCYSYCLIILRSSFSTLNVIPEPQCLELEEQRVVIQVDFQQEDTDSGCIKQHSHTSFEPLLQQFQTCMKELEQNNSNIAKMLIENVKGNYKLVVTDHNFITDALPHETINNIQNSAKLMVDAGFEKVCFEVYNGYRKEWLEDLLGKMRFQDYVIGKWIKTSEVALRVLFPSERRLYNCVFSNSMSPSSDLYFTELCRGSITKLLNFADSFANQSPSAWRLFKILDLFETLCNLIPEFESLFIDSLVNEAIKVKNRLGEISRDIFMEFGNLIFLTPDAEFDCWADGGVHPMTSAATGYIVMAFWSRQNLEQILQQYPLVDDDRAETSLFYSQMVLIMEQFESKLEAKSQIYGDPALRYFFMMNNLGHVTYRLETFWDHRFGTNVEQYFELYCRNSWNMVINVLKMDMNESVAPNSETDSMKDKLNIFNQKFREMCGIQSTWRVLNEQVRNFIITSIESILLPAYENFIGMYHNTVGKNVDEYIEYGIFDIKNHLSRSFILQDVDSVKGLDENQLVS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03788 526 Pfam Exo70 exocyst complex subunit 167 505 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre10g03788 526 SUPERFAMILY Cullin repeat-like 71 506 IPR016159 -
Trre10g03788 526 Gene3D Exocyst complex component Exo70 47 513 - -
Trre10g03788 526 PANTHER EXOCYST COMPLEX PROTEIN EXO70 74 504 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03788 Trre-Chr10 47239580 47241160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03788 105 508 EXO70 exocyst subunit family AT5G58430 41.475 6.98e-101 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03788 K07195 - tpra:123922483 775.778