Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03787 ATGAATGGAAAACCAGATGCATATAGTATGATTTCATCTGCTGCCTTTGCTCTCATGTCACTCAGTTTATCGAGACAAATTCAGTGCGGATTTGAAGTGGATCTTATGTCCTTTTATCTCGGATGTTTAATTCTACAACTCATGAAGATTAATATTTTGTTAGCTATTGTTGGAGTTTGTTATAGCTATTGTCTTATTATTCTCCGTTCTTCTTTTTCTTCGTTAAATGTTCCACATGAAACTCAGTGTCTTGCACCCGAAGAACAAGGAGTAGTCATCCAAGTTGATTTACATCAACAAGAAAATACCGATAATGAAAAAGTGAAAGGTAACTATAAATTGGTAGCGACTGACCACAACTTTATAACTGATGCGCTTCCTCATGAAACAATCAATAATCTTCAAAAATCGGCGAAATTGATGGTGGATGCTGGTTTTGAGAAAGTGTGTTTTAAGGTTTACATCAACTACCGTAAGAAATGGTTGGAAGACTTGTTAATAAATAAATTATTAAGATTAGGAAAGATGGGATTTCAAGATTACGTGATTGGAAGGTGGGTAAAAACTTCGGAGGTTTCTCTCAGAGTACTATTTCCTAGTGAGCGTCGACTCTACAATTGTGTCTTCTCGAATCCAATGTCTGCATCATCTGATCTCTATTTCTCAGAGCTTTGTTGTGGAGCGATAATTGAACTACTGAATTTTGCCGATTCATTTGCAAATCGAAGCCCTTCAGCATGGCGTTTGTTTAAAATCATTAACTTATTTGAAACTTTGTGTGATCTAATTCCTGAATTTAAATCATTGTTTCTTGATTCTTTGGTAAATGAAGCAATAAAAATCAAGAATAGATTGGGTGAAATCAGTAGAGACATTTTCATGGAATTTGGAAATATGATATTCCTTACAAGAGATGCCGAGTTTGATTGTGCGACTGATGGTGGAGTTCATCCAATGACTACTGCAGCTATTGGTTACATCGTGGGGGCTTTCTGGTCAAGACAGAACCTAGAGCAAATTTTACAACAATATCCCTTGGTTGTTGGAGATGGAGCGGGAACATCTTTATTCTATTCGCAGATGGAGTTGATAATGGAGCAGTTTGAGAGAAAATTGGAAGCTAAGTCACAAATTTATGGAGACCCGGCCTTAAGATATTTTTTTCATGATGAACAATTTAAGTCACGTTAA 1191 0.361 MNGKPDAYSMISSAAFALMSLSLSRQIQCGFEVDLMSFYLGCLILQLMKINILLAIVGVCYSYCLIILRSSFSSLNVPHETQCLAPEEQGVVIQVDLHQQENTDNEKVKGNYKLVATDHNFITDALPHETINNLQKSAKLMVDAGFEKVCFKVYINYRKKWLEDLLINKLLRLGKMGFQDYVIGRWVKTSEVSLRVLFPSERRLYNCVFSNPMSASSDLYFSELCCGAIIELLNFADSFANRSPSAWRLFKIINLFETLCDLIPEFKSLFLDSLVNEAIKIKNRLGEISRDIFMEFGNMIFLTRDAEFDCATDGGVHPMTTAAIGYIVGAFWSRQNLEQILQQYPLVVGDGAGTSLFYSQMELIMEQFERKLEAKSQIYGDPALRYFFHDEQFKSR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03787 396 Gene3D Exocyst complex component Exo70 84 389 - -
Trre10g03787 396 SUPERFAMILY Cullin repeat-like 118 388 IPR016159 -
Trre10g03787 396 PANTHER EXOCYST COMPLEX PROTEIN EXO70 103 388 IPR004140 GO:0000145|GO:0006887
Trre10g03787 396 Pfam Exo70 exocyst complex subunit 185 388 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03787 Trre-Chr10 47233808 47235109 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03787 117 388 EXO70 exocyst subunit family AT5G58430 44.792 8.26e-64 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03787 - - tpra:123922483 590.882