Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03782 ATGACGTCCATGCTCAAGCAAATTGTGAGATGTGTGATGCAGCCAAAGATATGGAGATTTGTGTGTTTTGTTTCATCTATTATTGGCTTGTTCTGTTATTCTCTCAGCTCTTCTTTCAATCATCTATTTGGGAAGTGGAACTTTTTTAAGGTATTTCTTTATAGTGCTTTCAGTTTCGTCATTTGTCTCGCAATCTTGTTTCCAAAAACATGCCACACCTCGAGTACTAGTCTTCCAATTAAGGCTCACTTGGTGTTTTTAATTTTCACAATCACCACTATATACTCATTCTTTTTTGATAAAGCTAACGGAAAACCAGATCTATATAGTCTTATTTCGTGTGCTGCTTTTGCTATCATGTCTCTAAGTTTGTCAAAGCAGAGTCACTTGGGATTTGAGGTTGATCTTCTATATTTCTTTTGCGGGTTTTTCACTTTACAGCTCATGAAGATTAAATTGTTATTAGTCATTGTTGGAATGTTTTTTAGTTATTCCCTCATCATCCTTCGTTTTTATTTGAGTGTCATAACAGAAATCGGTCATCTTGGACTTGAACTACAAATTCAAGACCAACATTCCATAGTCATTCATGTCCATTCATATTCAGAAGAATCTGAAACTAACTACTATTCCCTTCAAGTGGATTTCCCCCATACTAGTAATGTTGAAGAAAATTTTCATCTTAACATGCATCAAGAAACCGTTAATTCTGAAAGTACTCCAAATGTTCCATCACAACAAGGCAATAGGGATGGAGATTACATCAGACTTGACAATTTTATAAAGCATCTATTTGAGATGAATGAGAAGCTTAATTTGGTTATTTGGCAGCAGTTTATGGTGATAGGGCAAGAAGTCTTTCCTGAATCCTTTATTTTGGACAATACCTTCAAGATCAAGGGGATGAAAGACATTAACGAAGACCTACATAAAATTGTGAAGAACTTCATTGAAGCTGGTTTTCAGGCCGAGACGTGTTGTAACATATACAACATTTTCCGAATTGAATTCTTAAACAAGTGCTTGTATAGACTTGAATTGCAAGAGTTCAACTTGTGTGATGTTGAGAATGAGAATATTGGGAGTTCGATTAATGCTTTCAATACAGCTCTAATGATACTTCTTCCTAATGAGAGGGTGATCTGGCATCGAGTCTTTTCTGGATTTTCTCTGAAGTATAGCCTTTTTACCTCGTCAGAGTGGAAAAGAATGGAAATTGAATTGTGGAATAAATTTATGGAGTTCGAGGCTCGAACTCACTACAATTCTACACAGGAAGGTTTTGTTGGTTGTGGGGTTCATCCTCATACTCGCGGAGTAATGAATTGCATTAAGAATGTTTCTGAAGATAGTAATAATACGACATATTTTCCCATCCCTTCGATCATACAATTATTAGAGAGTAATTTGGATACTAAATCCAAAAACTACAAAAATAATGCTTTAAGGTATCTTTTCATGCTGAATAACACTAGATATATACAATTGATTGCTAGATATGATCCCTTACTAACCATTTTAGGCGAAGATTGGATTCAAATACAAACTTCAAAAGTTAGGCGACACATTAGACTCTTTCTAAAATGGTCATGGAATAAGCTTGTGAGCTTAATGAATAATAACAAGTCAATGGCCCCTAAGGTTGCCATAAAATCAATGTGTCTGTTCCATCTACACTTTTATGATATATGCGTTGCTCAGTCTGAAAGTTTTGTTGTCGATGAGTGGCTAAAAGAAGTAATGCGATTGTCAGTGAAAAAGATGATTTTGCCACTATATGAAAACTTCATCGGAAGGATCAAGGATGTTCTTGGCAAGGATGATGTTGATTGGTATGTTAAGTATGGAGTTATAGACGTTGAAATTCAACTTGATTGTTTATTTCGTCAAAACCACCCGATCAAGCTGCCGCCATCCACTTCCGGTCACTGTAGCTGTTAG 1941 0.357 MTSMLKQIVRCVMQPKIWRFVCFVSSIIGLFCYSLSSSFNHLFGKWNFFKVFLYSAFSFVICLAILFPKTCHTSSTSLPIKAHLVFLIFTITTIYSFFFDKANGKPDLYSLISCAAFAIMSLSLSKQSHLGFEVDLLYFFCGFFTLQLMKIKLLLVIVGMFFSYSLIILRFYLSVITEIGHLGLELQIQDQHSIVIHVHSYSEESETNYYSLQVDFPHTSNVEENFHLNMHQETVNSESTPNVPSQQGNRDGDYIRLDNFIKHLFEMNEKLNLVIWQQFMVIGQEVFPESFILDNTFKIKGMKDINEDLHKIVKNFIEAGFQAETCCNIYNIFRIEFLNKCLYRLELQEFNLCDVENENIGSSINAFNTALMILLPNERVIWHRVFSGFSLKYSLFTSSEWKRMEIELWNKFMEFEARTHYNSTQEGFVGCGVHPHTRGVMNCIKNVSEDSNNTTYFPIPSIIQLLESNLDTKSKNYKNNALRYLFMLNNTRYIQLIARYDPLLTILGEDWIQIQTSKVRRHIRLFLKWSWNKLVSLMNNNKSMAPKVAIKSMCLFHLHFYDICVAQSESFVVDEWLKEVMRLSVKKMILPLYENFIGRIKDVLGKDDVDWYVKYGVIDVEIQLDCLFRQNHPIKLPPSTSGHCSC 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03782 646 Pfam Exo70 exocyst complex subunit 461 624 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre10g03782 646 SUPERFAMILY Cullin repeat-like 304 628 IPR016159 -
Trre10g03782 646 Gene3D Exocyst complex component Exo70 398 634 - -
Trre10g03782 646 Gene3D Exocyst complex component Exo70 285 397 - -
Trre10g03782 646 PANTHER EXOCYST COMPLEX PROTEIN EXO70 302 397 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03782 Trre-Chr10 47222279 47224219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03782 401 629 EXO70 exocyst subunit family AT5G58430 34.387 1.27e-31 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03782 - - psat:127118472 650.588