Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03777 ATGACACATATACTAATCCAAATTTGGAGATGGTTGATGCAGCCAAAGGTGTGGAGATTTGTTGGCTTTGCTTCAGCTATTGTTGGACTGCTCTGTTATGCTCTCAGCTCTTCCTTCAACTATCTCTTTGGAGATTGGAATTTGCTGAAAATATTATTTTATATTGTTTTCAGTTTCATCATATGTTTTGTGATTTTATTTTCAAAATTATTGCAACATTCTAGAAGTCTCCTATTCAAAGCTCATACAGCATTTTTGGTATTGACAATCACATCCGTTTATTCCTTTTTCTTCGATAAAGTGATGAATGGAAAACCAGATGCATATAGTTTAATTTCATGTGCTGCTTTTGCTATCATGTCATTGAGTTTGTCGAGGCAAACTCAATGCGGATTTGAAATCGATCTTCTCTATTTCTTCCTTGGATGTCTAATTGTGCAACTCATGAAGATCAAATTGCAGTTGTTCATTCTTGGAGCAGGTTTCAGCTACTCTCTTATTATTCTCCGTTCTTCTTTCTCTTCTATTGATGCAGCTAGAGTAGATAATCAATACTCTCAACTACAAGATGGAAATCGGGTGGTTCTTTATATAGATTCTCTACAACTTGCCAATACCCATATCGATATTGCTAGTTTTAGCAATAGTAATAACAATAGCAATAGAATCGATTCACCAAAATTGATGACCGCAAATGATATTAGTAGTGTGATGGAACAACTAGGTACTTTCGTGAAGGCGCTTCAACATGAAAATGTAAATATCATTCAAATGGTTTTGGAGCATAAAAAAGGACTTTCTGCTAAAGAAAGCTCTCAATTGGTGGTGACTGACGCTAACTTCATGATGGATGCGCTGAAGCCAGAAATAATCAAAGGCCTTGAGGAAACAGCAAAGGTTATGGTGAGTGCTGGGTTTGAGAAGGATTTTTCGGATGTGTACAACAGTTGTCGGAGGGAATGCTTGGATAAGTGCCTAATGGATAGATTATTTAGGTTACAAAAGCTAAGAATTGAGGAAGTTCATAATATACCGTGGAAGGATCTCAAAGACGAGATTGAAATATGGATTAGAGCTTCTAATGTTGCTCTCAAGATACTTTTCCTCGAACGCGTTTTATTCTGA 1125 0.3636 MTHILIQIWRWLMQPKVWRFVGFASAIVGLLCYALSSSFNYLFGDWNLLKILFYIVFSFIICFVILFSKLLQHSRSLLFKAHTAFLVLTITSVYSFFFDKVMNGKPDAYSLISCAAFAIMSLSLSRQTQCGFEIDLLYFFLGCLIVQLMKIKLQLFILGAGFSYSLIILRSSFSSIDAARVDNQYSQLQDGNRVVLYIDSLQLANTHIDIASFSNSNNNSNRIDSPKLMTANDISSVMEQLGTFVKALQHENVNIIQMVLEHKKGLSAKESSQLVVTDANFMMDALKPEIIKGLEETAKVMVSAGFEKDFSDVYNSCRRECLDKCLMDRLFRLQKLRIEEVHNIPWKDLKDEIEIWIRASNVALKILFLERVLF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03777 374 SUPERFAMILY Cullin repeat-like 236 366 IPR016159 -
Trre10g03777 374 Gene3D Exocyst complex component Exo70 187 373 - -
Trre10g03777 374 PANTHER EXOCYST COMPLEX PROTEIN EXO70 201 370 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03777 Trre-Chr10 47182861 47183985 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03777 276 368 EXO70 exocyst subunit family AT5G58430 55.914 7.89e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03777 - - cam:101500706 516.924