Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03775 ATGAAGATTAAATTAGAGTTATGCATTCTTGGAGTAGGTTTCAGCTATTTAATCATTATTCTTCGTTCTGTTTTCTCTTCCATAAATGCTGTAATATATAATGAAGATCCAAATAGTCTTCAAGTTGTGGTCAATTCACATTCACCACGACTTGCCAGGACTGATATTCAGAAGGTTAGTGTAGAGGAAGTGCAGAATGTGTCATTGAGTGACTTTAGAGGCAAAATTGAAAGATGGATTAAGACTTCAAACGTGGCTTTCAAGATATTGTTCCCCACTGAGCGGCGATTATGCAATCCGGTTTTCTTTGGATTCTCCTCTGCCGCTGATATATTGTTCACAGGTGTTTGCAGGGAGTCTACACTTCAGCTGCTAAATTTCACCGATGCTATAGCCTAA 399 0.386 MKIKLELCILGVGFSYLIIILRSVFSSINAVIYNEDPNSLQVVVNSHSPRLARTDIQKVSVEEVQNVSLSDFRGKIERWIKTSNVAFKILFPTERRLCNPVFFGFSSAADILFTGVCRESTLQLLNFTDAIA 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03775 132 Gene3D Exocyst complex component Exo70 20 132 - -
Trre10g03775 132 Pfam Exo70 exocyst complex subunit 77 132 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre10g03775 132 SUPERFAMILY Cullin repeat-like 52 132 IPR016159 -
Trre10g03775 132 PANTHER EXOCYST COMPLEX PROTEIN EXO70 51 132 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03775 Trre-Chr10 47157650 47158048 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03775 51 132 EXO70 exocyst subunit family AT5G58430 59.756 1.78e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03775 K07195 - mof:131147803 108.227