Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03774 ATGAATGGAAAACCAGATGCATATAGCTTGATTTCATGTGCTGCTTTTGCTATCATGTCATTGAGTTTGTCGAGGCAAACTCAGTGTGGATTTGAAATCGATCTTCTCTATTTCTTCCTTGGTTGTCTAATTGTGCAACTCATGAAGATCAAATTGCAGTTGTTCATTCTTGGAGCAGGTTTCAGCTACTCTCTTATTATTCTCCGTTCTTTTTTATCTTCTATTGATGCAGCTAGAGTAGATAATCAATACTCTCAACTCCAAGATGGAAATCCGGTGGTTCTTTATATAGATTCTCTACAACTTGCCAATACTGATATGGATATTGCTAGTTCTAGCAATAGTAATAACAATAGCAATAGAATCGATTCACCAAAATTGATGACCGCAAATGATATTAGTAGTGTGATGGAACAACTAGGTACTTTTGTGAAGGCGCTTCAACACGAAAACTTAGATATCATTCAAATGGTTTTGGATCATAAAAAAGGACTTTCTGCTAAAGAAAACTCTCAATCGGTGGTGATTGACCCTAACTTCATGATGGATGCGCTGAAGCCAGAAACAATCAAAGGCCTTGAGGAAACAGCAAAGGTTATGGTGAGTGCTGGGTTTGAGAAGGATTTTTCGGATGTGTACAACAGTTGTCGGAGGGAATGCTTGGACAAGTGCCTAATGGATAGATTATTTAGGTTACAAAAGCTAAGCATTGAGGAAGTTCATAATATATCGTGGAAGGATCTCAAAGACGAGATTGAAATATGGATTAGAGCTTCTAATGTTGCTCTCAAGATACTTTTCCCTGGAGAGCGAAGACTCTGCGATCGCGTTTTATTCGGATTCTCATCCATCGCTGATTTCTCCTTCATGGATATTTGCAAGGGATCCACCATTCAACTTTTGAATTTTGCTGATTTTGTTTCCACCAGAAGCTATTTGCCAGAGCATTTGTTTAAAATTCTGGAGATGTTTGAAACATTGCGTGACCTAATTCCTGAATTTGAGTCATTATTTTGTGATCAATACAGTGTATCTCTAAGAAATGAAGCAATGACCATATGGAAGAGACTCGGGGAATCAATCAAAGGCCTTTTCATGGAGTTGCAGTATATGATTGGCCGAGATCCGGCTAACATGACGGTTAATGGTGGCGGTCTTCACCCGATTACCCAGTACGTGATGAGCTATTTAGGTGCAGTTTGTCAATCCCGACAAACACTAGAGCAAGTGTTTGAAGATTCCTCATTTTCTGGGATGATTCATAGGATTATGGACATATTGGAGAGTACTTTGGAAATTAAGTCCAAACGCTACGAGGATCCTTCTTTAGGCTACATATTCTTAATGAATAATAACACATATATAGTTCAAGTGACCAAAGATAATGAATTGGGAACCACTTTGGGGTATGATTGGCTCCAAAAACACTCTGTGAAAGTTTGGCACTATCATAGTAGGAAAGTTCAACAACCATTGTACAACACCCGACACTACTATATGCAAGCATTGTACAACATTCAAAAGATTGGTGAAATAGATTCGAGCAATTTGAAAGGTTCCGAAGGATCAAAGGGGTACGAAAGAGAAAGAGATGTGCAGCTGATAGAAGAATCATCCTCTCAACTAGAAGAAAGAATTTGGACAAAGGACTCAGAGAAAGAGATAAGAACAATAGTGATCTCTCCCTCACTGCAGTTTGGGATGGCCCCTAAAATGTCACCGGAAGATGGGTTTGCCTGGAAAAAAATTGGCGAAAAAGAGATACTTGGCTTCAAATACCCGAGGAGTTACTACATGTGCATGTGCAACCACGACCACGACGCGATATATTCAGGTGGAGTACAACAACTTGATGACAATCCTAACATGTTTGAAGTAACATATTCTGGTGGATTCAAGAAGAAAGTACAACAACTTGATGACAATCCTAACATGTTTGAAGTAACATACAAGGGTGGACGTTCCTGCTGCATGTCCTTAACAAAAACATCATTAAGTTTACCACCACGAAAAATAAGGAATATCTCAAACTCAAGGGATATGACTCAAACCACTATACCTCCATCATCAACTTCATATTCTAGGTGGCTTTCATCTGCCACACCAGCCAAATACATTGACTCTATGATGGCCAAGCTAGCTGCTCCGGATGACGGTGGGCATCATCCTATGATGGAGAATGTCATAGGTTTTCTTCTTTCTGCTATCAGATCACAGGTCTCGATCAGCTGTGAATCACAGCAGACCGAGGCTGTTATTGGAGAAAAAGCATTTTCACCACAAATGGAGGGGACAATGGAACTGTTAGAGAGCATATTAGCATCGAAGTCCGGAAAATATGTGGACGAGTCGTTGCGTCATTTTTTCATGATGAATAATTGGAGGTATTTAGAAGTGGCAAATAAAAGAATTGAACTGCATCCAATTTTTGGCGATGATTGGTTCCAAAGAAACAGAATAAAAGTCCAACAAAAACTTGAACTCTATCAAAGAGAGTCATGGGATAAGGTGTTGGAATTTTTAAAGTTGGATATTATCAATGACTCCATGGAAATTAATTGTGCAATAGACTTGATGAAAGAAAAGCTCAGATTGTTTAACATGCACTTTACAGAGACATGTAGAATTCAGTGCACATGGTCTGTTCATGATGAGAAGCTAAGGGGAGAAATAATTTCATCTCTCAAAAACATCTTGCTGCCAGCATATGGAATCTTCATTGGGAAGTTTCAGGATTTTCTTAAAGACAAGGCTTACAAGTATATTGAGTATGGAATGTTTGACATTCATGATGTACTTGATAATTTGTTTCTCGGAACCAGGCATGTAATGTTATTTGGTATGGACATAAGCACTTTGTGA 2862 0.3882 MNGKPDAYSLISCAAFAIMSLSLSRQTQCGFEIDLLYFFLGCLIVQLMKIKLQLFILGAGFSYSLIILRSFLSSIDAARVDNQYSQLQDGNPVVLYIDSLQLANTDMDIASSSNSNNNSNRIDSPKLMTANDISSVMEQLGTFVKALQHENLDIIQMVLDHKKGLSAKENSQSVVIDPNFMMDALKPETIKGLEETAKVMVSAGFEKDFSDVYNSCRRECLDKCLMDRLFRLQKLSIEEVHNISWKDLKDEIEIWIRASNVALKILFPGERRLCDRVLFGFSSIADFSFMDICKGSTIQLLNFADFVSTRSYLPEHLFKILEMFETLRDLIPEFESLFCDQYSVSLRNEAMTIWKRLGESIKGLFMELQYMIGRDPANMTVNGGGLHPITQYVMSYLGAVCQSRQTLEQVFEDSSFSGMIHRIMDILESTLEIKSKRYEDPSLGYIFLMNNNTYIVQVTKDNELGTTLGYDWLQKHSVKVWHYHSRKVQQPLYNTRHYYMQALYNIQKIGEIDSSNLKGSEGSKGYERERDVQLIEESSSQLEERIWTKDSEKEIRTIVISPSLQFGMAPKMSPEDGFAWKKIGEKEILGFKYPRSYYMCMCNHDHDAIYSGGVQQLDDNPNMFEVTYSGGFKKKVQQLDDNPNMFEVTYKGGRSCCMSLTKTSLSLPPRKIRNISNSRDMTQTTIPPSSTSYSRWLSSATPAKYIDSMMAKLAAPDDGGHHPMMENVIGFLLSAIRSQVSISCESQQTEAVIGEKAFSPQMEGTMELLESILASKSGKYVDESLRHFFMMNNWRYLEVANKRIELHPIFGDDWFQRNRIKVQQKLELYQRESWDKVLEFLKLDIINDSMEINCAIDLMKEKLRLFNMHFTETCRIQCTWSVHDEKLRGEIISSLKNILLPAYGIFIGKFQDFLKDKAYKYIEYGMFDIHDVLDNLFLGTRHVMLFGMDISTL 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03774 953 ProSiteProfiles WRKY domain profile. 575 637 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre10g03774 953 PANTHER EXOCYST COMPLEX PROTEIN EXO70 115 484 IPR004140 GO:0000145|GO:0006887
Trre10g03774 953 Pfam WRKY DNA -binding domain 575 630 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre10g03774 953 SUPERFAMILY Cullin repeat-like 716 937 IPR016159 -
Trre10g03774 953 Gene3D Exocyst complex component Exo70 703 944 - -
Trre10g03774 953 Gene3D Exocyst complex component Exo70 88 530 - -
Trre10g03774 953 SUPERFAMILY Cullin repeat-like 136 486 IPR016159 -
Trre10g03774 953 SUPERFAMILY WRKY DNA-binding domain 573 630 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre10g03774 953 Gene3D WRKY domain 564 629 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre10g03774 953 SMART WRKY_cls 574 636 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre10g03774 953 Pfam Exo70 exocyst complex subunit 255 485 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre10g03774 953 Pfam Exo70 exocyst complex subunit 712 934 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03774 Trre-Chr10 47151657 47157421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03774 711 940 EXO70 exocyst subunit family AT5G58430 41.026 2.25e-39 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre10g03774 Exo70 2.8e-44 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03774 K07195 - cam:101500706 988.793