Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03772 ATGAAGCACATTATAATCCAAATTCAAAGATGGCTTATGCATACAAATGTATGGAGAGTTGTGGGCTTCAGTTCAGCTGTTGTTGGATTGGTTTGTTATGCTCTCAGCTCGTCTTTCAACCATCTTTTTGGAAATTGGAATTTGTTGAAAATATTTCTTTACTGTGTTTTCTGTTTCATCATCTGCTTGCTGATTTTATTAGCAATGATATGGAATCACTTGAGAAGTCTCAGGTTCCAAGTTCAATTCCCATTTTTGGTTTTAACCATTACCTCAGTGTATTCCTTTTTCTCCGATAAAATGATCAATGGGAAACCAGATGCATGTAGCCGCATTTCAAGTTTTGCCTTTGCTATCATGTCTCTCAGTTTGTCGCGGCAAACTCAGTGCGGATTTGAAATTGATCTTCTTTACTTTTTTCTTGGAAATCTTATTGTGCAACTCATGAAGATTAAATTGGAGTTATTTATTGTTGGAGCTGGTTTCAGCTATTCTCTTATTATTCTTCGTTCTTGCTTTCCTTCCACTTCCTTAGATAGAGGAGTAGATAATGAGTGCCATAGAATCAATGATGAAAATTCCGTAGTTCTTCATGTCATTCCACCACAATTAGCTATTACTGATATTGCTAGTGGCATGATGGAACAACTCAGGACTTATGTTAATGCAATTCAGCAGGAAAAATTTTATGTCATTGACATGATTTTGGAGGAGATAAAGGAATACTTTGACGATGCTTCAGATTTGGTTTTGTCCGAACACAGCTTGGAAGGAGTGTTCAAACCAATAGAAAATTTGAATTATATGTTGGAAGCACTGCCACTGGAAACAATTAACAACATACAGGAAATAACAAAGTCGATGGTTGGTGCTGGTTTTGCGAAGGAGTGTTCCAATGTGTACAGCAGTTGCCGGAGGCAATGCTTGGAGGAATGCCTAATAAAGCAATTATTAGGTTCAGAGAAACTTAGTATCGAGGATGTTAGCAACATTCCATCGAAGGATCTCAAACTCCACATTAATAGATGGATTAAGGCTTCAAAGGTTGCTCTCAAGATATTGTTCCCCACGGAACGGCGACTATGTGACGTTGTTTTCTTTGGGCTCTCTGCGGTCGCTGATCTCTGCTTTTCAGAGGTTTGTAGAGGATGGACTATCTATTTGCTGAATTTCGGTGAAGCTGTAGCGAATGGAAGTCGTTCGCCAGAGAAGTTATTTCAAATCCTTGACATGTTTGAAACATTATGCGACTTAATTCCAGAGTTTGAGTCTCTGTTTTGTGATCAGTATAGTGTGTCGCTAAGAAATGACGCAAACACAGTTTCGAACAAATTGGGGGAAGCAATAGTGGCCATTTTCATGGAATTTGCAAATAAGATTCACCATGACCCGGTGAAAGCGGCAGTTCCCGGTGGCAGGATTCACCCTCTTGTCCGTTATGTGATGAACTACCTTATCCTCACCTGTGACTATCAGCAGACATTGGAGCAGGTGTTTGAAGACTATGGGCATCTGTTAAAGGAATACCTCAAGCTTGATGATACTGTGCCCTCCTCTTCCTCTTTTTCAGTGATAGATCATATTATGGAGGTATTGGAAAATAATTTGGAAGCCAAGTCGAAAGTCTGTAATGATCCTGCTTTGTGTTGTGTTTTCTTAATGAATAGTAGCAGCTACATACTTAACAAGGCGAAAGATAATGAATTCGGGGAATTTTTAGGGAATGATATGATCCAAAAACACAAAGCAAAAGTTATGTACTATTATGAGCAATATCAGAGAATCTCATGGAATAAGGTGTTGGGATTTCTGAAGCTTGACAAGAGTGGATTAGTGCCTCCTAGTATGGTAGAGAAGCTCAAATCATTCAATATATTGTTTGAGGAAATATGCAAGGTTCAGTCTTTGTGGTTTGTCTTCCATGAACAGCTTAGAGACGTCATAAGAATTTCCCTTAAGAGAGACTTGTTGCCAGTGTACAGAAACTTTATTGGGAGGTTCCACAGTGTTATGAAACTTAGAATACATGCTGATAAATATATTAAGTACGGGATGAAGGATATTGAAGCAAGACTCGATGATTTGTTTCAGGGAAGCAGTGGATCAACTAGTGGTCAAAAGCGAGGATAA 2130 0.3873 MKHIIIQIQRWLMHTNVWRVVGFSSAVVGLVCYALSSSFNHLFGNWNLLKIFLYCVFCFIICLLILLAMIWNHLRSLRFQVQFPFLVLTITSVYSFFSDKMINGKPDACSRISSFAFAIMSLSLSRQTQCGFEIDLLYFFLGNLIVQLMKIKLELFIVGAGFSYSLIILRSCFPSTSLDRGVDNECHRINDENSVVLHVIPPQLAITDIASGMMEQLRTYVNAIQQEKFYVIDMILEEIKEYFDDASDLVLSEHSLEGVFKPIENLNYMLEALPLETINNIQEITKSMVGAGFAKECSNVYSSCRRQCLEECLIKQLLGSEKLSIEDVSNIPSKDLKLHINRWIKASKVALKILFPTERRLCDVVFFGLSAVADLCFSEVCRGWTIYLLNFGEAVANGSRSPEKLFQILDMFETLCDLIPEFESLFCDQYSVSLRNDANTVSNKLGEAIVAIFMEFANKIHHDPVKAAVPGGRIHPLVRYVMNYLILTCDYQQTLEQVFEDYGHLLKEYLKLDDTVPSSSSFSVIDHIMEVLENNLEAKSKVCNDPALCCVFLMNSSSYILNKAKDNEFGEFLGNDMIQKHKAKVMYYYEQYQRISWNKVLGFLKLDKSGLVPPSMVEKLKSFNILFEEICKVQSLWFVFHEQLRDVIRISLKRDLLPVYRNFIGRFHSVMKLRIHADKYIKYGMKDIEARLDDLFQGSSGSTSGQKRG 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03772 709 Gene3D Exocyst complex component Exo70 207 705 - -
Trre10g03772 709 Pfam Exo70 exocyst complex subunit 342 694 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre10g03772 709 SUPERFAMILY Cullin repeat-like 253 696 IPR016159 -
Trre10g03772 709 PANTHER EXOCYST COMPLEX PROTEIN EXO70 242 698 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03772 Trre-Chr10 47145136 47147265 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03772 259 707 EXO70 exocyst subunit family AT5G58430 54.825 1.15e-162 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03772 - K07195 psat:127118479 986.097