Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03756 ATGTCACCCCTTGCAATTCTTTTACCTTTAGCTCTCTTTCTATTCTTCTTCTACAAAAAACACAAAACATCTAAGAAACAAACTCTTCCCCCAGGTCCTAAAGGCCTTCCTTTCATTGGAAACTTACACCAAATTGATAGTTCATCTCTTGGTTTAAGCTTCTATGAACTCTCAAAGAAATATGGTTCTTTAACCTTCCTTAAACTTGGTTCAAGACAAACACTTGTTGTTTCCTCAGCTAAAATGGCCAAACAAGTAATGAAAACACACGATATCGATTTTTGTAACCGACCTGCTTTAACGAGCCATATGAAATTCTCATATGATGGATTAGATCAAGCATTTTCACCATATAGAGAATATTGGAGACACACTAAGAAATTTTCTTTCATCCATTTTCTAAGTGTTAAAAGAGTCTCAATGTATGCCCCGGTTAGAAAATACGAGGTATCTCAAATGATCAAGAGGATATCGGAACAATATGCTTCTTCCAACAAAGCTGTGAACCTACATGAGCTTCTCATGGGTCTTACAAGCGCGATAGTTTGTAAGACCGCGTTTGGTAGAAGGTTCGAAGATGAAGGAACCGAGCGTAGCATGTTTCATGATTTGCTTAAAGAAGCGCAAGAATTGACAGTTTCGTTCTTTTATACGGATTATTTGCCTTTTGTTGGAGGGATTGTTGATAAGTTCAGTGGAATAATGAGTCGTCTCGAGAATTTGTTCAAGATTTTAGATGGATTTTTTCAAAATATTGTTGATGAACATCTTGATCCTGAAAGGAAGCAGTTGCCTCCACAAGAAGATGTAATTGATGCCTTGATTGGATTGAAGAATGATCCTTACTGGTCAATGGATCTCAAATCTGAGCACATCAAACCCTTGATCATGAATATGGTGTTGGCGGGGACAGACACAATTTCTGCAGCAGTAGTTTGGGCTATGACTGCACTAATGCAGAATCCAAGAGTGATGCAGAAAGTACAGCAAGAGGTTCGTAAAGTGTATGAAGGAAAGAGTTTTATAGAGGAAGAAGATGTCCAAAACCTTCCATATCTCAAGGCAGTTATAAAAGAAACAATGAGATTGTACCCTTCATTGCCTATACTTTTTCCAAGAGAAACGATGAAGAAGTGTGAAATTGAAGGGTACGATATTCCAGAGAAGACATTGGTGTTCGTGAATGCTTGGGCGATCCATAGAGACCCAGAAGCATATGAGAATCCAGAAGAGTTTTATCCAGAGAGATTTGTAGGCAGTGATATAGATTTAAAAGGACAAGATTTTGAGCTAGTTCCATTTGGTTCCGGGCGAAGAGTTTGCCCCGGCTTGAACATGGCTGTTGCTACCGTGGACTTAGTACTTGCTAATCTTCTCTATTTGTTTGATTGGGAAATGCCCGAAGGAGTGAAGAGGGAAGATATAGACATTGAAGGTCTTCCGGGACTTATTCAACACAAGAAAAATCCTCTTTGCCTTGTTCCTAAGAAGTGA 1494 0.3889 MSPLAILLPLALFLFFFYKKHKTSKKQTLPPGPKGLPFIGNLHQIDSSSLGLSFYELSKKYGSLTFLKLGSRQTLVVSSAKMAKQVMKTHDIDFCNRPALTSHMKFSYDGLDQAFSPYREYWRHTKKFSFIHFLSVKRVSMYAPVRKYEVSQMIKRISEQYASSNKAVNLHELLMGLTSAIVCKTAFGRRFEDEGTERSMFHDLLKEAQELTVSFFYTDYLPFVGGIVDKFSGIMSRLENLFKILDGFFQNIVDEHLDPERKQLPPQEDVIDALIGLKNDPYWSMDLKSEHIKPLIMNMVLAGTDTISAAVVWAMTALMQNPRVMQKVQQEVRKVYEGKSFIEEEDVQNLPYLKAVIKETMRLYPSLPILFPRETMKKCEIEGYDIPEKTLVFVNAWAIHRDPEAYENPEEFYPERFVGSDIDLKGQDFELVPFGSGRRVCPGLNMAVATVDLVLANLLYLFDWEMPEGVKREDIDIEGLPGLIQHKKNPLCLVPKK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03756 497 CDD CYP71-like 60 491 - -
Trre10g03756 497 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 FunFam Cytochrome P450 83B1 16 494 - -
Trre10g03756 497 PANTHER CYTOCHROME P450 71B11-RELATED 15 496 - -
Trre10g03756 497 SUPERFAMILY Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Trre10g03756 497 Gene3D Cytochrome P450 22 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03756 497 Pfam Cytochrome P450 30 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03756 Trre-Chr10 46957083 46959728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03756 1 497 Cytochrome P450 AT4G31500 44.622 1.88e-153 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03756 - - gmx:100803017 721.079