Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03748 ATGTCGAAGCTAGTTTGCGTCACCGGCGGCAGCGGATGCATCGGTTCATGGCTAGTCCATCTTCTTCTCCTCCGGGGCTACACCGTTCACGCCACCGTCCAAAATCTCAATGATGAGAACGAAACGAAGCATCTAGAAGCTCTCGAAGGAGCACAAACTAATCTCCGTCTCTTCCAGATCGATCTCCTTAACTACGACACAATCCTCGCTGCTGTCCGCGGTTGCGTCGGAATTTTCCACCTCGCTTCACCTTGCACTGTAGACAAAGTTCATGATCCTCAGAAGGAGCTTTTGGATCCTGCAATTAAAGGGACTTTGAATGTGCTTACTGCAGCTAAGGAAGTAGGGGTGAAGCGTGTGGTTGTTACCTCGTCTGTCTCGGCGATTACTCCTAGTCCTGATTGGCCTTCTGATGTTGTTAAAAGAGAGGATTGTTGGACTGATGTTGAATATTGCAAGAAAAAAGAGTTGTGGTATCCGTTGTCCAAAACATTGGCTGAGAAAGCTGCGTGGGATTTTTCCAAAGAAAATGGTTTGGATGTTGTTGTGGTGAATCCCGGTACTGTGATGGGTCCTGTTATTCCACCACGGCATAATGCAAGCATGCTCATGCTTGTGAGACTTCTTGAAGGCTGCGCTGAAACATTTGAAGACTATTTTATGGGATTGGTCCACTTCAAAGATGTAGCATTGGCGCATATTTTGGTGTATGAGAACAAAGAAGCATCTGGTAGACATGTGTGTGTTGAAACTATCTCTCACTACGGTGATTTTGTGGCAAAAGTTGCTGAACTTTATCCAGAATATAGTGTTCCTAGGATGCAGCGAGATACGCAACCTGGATTGTTGAGAGCGAATGATGGATCAAAGAAGCTCATAGATTTGGGTTTGGAATTCATTCCAATGGAGCAAATTATCAAGGATGCTGTAGAGAGTTTGAAGAACAAAGGATTCATTTCTTGA 963 0.4496 MSKLVCVTGGSGCIGSWLVHLLLLRGYTVHATVQNLNDENETKHLEALEGAQTNLRLFQIDLLNYDTILAAVRGCVGIFHLASPCTVDKVHDPQKELLDPAIKGTLNVLTAAKEVGVKRVVVTSSVSAITPSPDWPSDVVKREDCWTDVEYCKKKELWYPLSKTLAEKAAWDFSKENGLDVVVVNPGTVMGPVIPPRHNASMLMLVRLLEGCAETFEDYFMGLVHFKDVALAHILVYENKEASGRHVCVETISHYGDFVAKVAELYPEYSVPRMQRDTQPGLLRANDGSKKLIDLGLEFIPMEQIIKDAVESLKNKGFIS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03748 320 Gene3D - 1 320 - -
Trre10g03748 320 Pfam NAD dependent epimerase/dehydratase family 5 246 IPR001509 -
Trre10g03748 320 CDD FR_SDR_e 5 297 - -
Trre10g03748 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 314 IPR036291 -
Trre10g03748 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 310 - -
Trre10g03748 320 FunFam Cinnamoyl-CoA reductase 1 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03748 Trre-Chr10 46922613 46925678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03748 3 320 Monolignol Biosynthesis Gene Families AT5G58490 74.528 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03748 - - gmx:100803241 558.525