Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03728 ATGTCAGCACCCGTCCTCCTCGCCCGTATTTTCCGGGGAAAACCGTTATACGAAAGAGCTTTAGTTTTAATAAAATGTTTTGCGGCAGGAGTTATCCTCTCAACATCCTTAGTCCACGTTCTCCCTGACGCGTACGCAGCACTCTCTGATTGCCACGTGGCATCACATCATCCATGGAAGGATTTCCCCTTTTCTGGATTGGTCACTCTTATCGGCGTTATCCTCGCTCTATTCGTGGATCTTGTTGCTAGTTCCCATGTTGAACACGCGCAGTACGCGCCTGTGAGTGCGGGTGAGAAAGAATTAGGAGTTGAACTTGGTGGTGGTGGTGGTGGTGAAGGTGATTGTGAGAGAGGTGAAGAATTGATTAAGTTGAAACAGAGATTGGTATCGCAAGTTTTAGAGATTGGGATAATATTTCATTCAGTGATAATTGGTGTGACTATGGGTATGTCTCAGAATGTTTGTACTATAAGACCTTTGGTTGCTGCTTTGGCTTTTCATCAGATTTTTGAAGGAATGGGTCTTGGTGGTTGTGTTGCTCAGGCAGGATTTAGCTATGGAACAGTGGCGTACATGTGTTTCATGTTTTCAGTAACAACCCCAATGGGGATAATTTTAGGGATGATATTATTCTCATTGACAGGTTATGATGATAGTAACCCAAATGCCTTAATAATAGAAGGGTTATTAGGTTCAATTTCTTCAGGAATTCTAATTTACATGGCTCTTGTTGATCTCATAGCAGCTGATTTCTTTCACAACAAGCTTATCAACTCTGATCCACGTTTGAAAAAGGCTTCTTTTGTTGCCTTAACTATGGGTTCTGCTTCTATGTCTATTCTAGCTCTTTGGGCTTGA 861 0.4228 MSAPVLLARIFRGKPLYERALVLIKCFAAGVILSTSLVHVLPDAYAALSDCHVASHHPWKDFPFSGLVTLIGVILALFVDLVASSHVEHAQYAPVSAGEKELGVELGGGGGGEGDCERGEELIKLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSYGTVAYMCFMFSVTTPMGIILGMILFSLTGYDDSNPNALIIEGLLGSISSGILIYMALVDLIAADFFHNKLINSDPRLKKASFVALTMGSASMSILALWA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03728 286 NCBIfam ZIP zinc/iron transport family 3 286 IPR004698 GO:0005385|GO:0016020|GO:0071577
Trre10g03728 286 PANTHER ZINC/IRON TRANSPORTER 11 280 - -
Trre10g03728 286 Pfam ZIP Zinc transporter 3 283 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03728 Trre-Chr10 46707834 46710680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03728 4 286 Inorganic Solute Cotransporters AT2G30080 68.227 2.59e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03728 K14709 - gmx:100797310 447.203