Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03727 ATGGCAACAACGGAATGTTCTTCAACAGACTTATCTCGATCAACCTCATGCCGCGATTCCGTCGCGGCATCACACCTCAAAATAATCTCCCTCTTCGTCATCTTCATCACAAGCGCAATCGGAATGTCAGCACCCGTCCTCCTCGCCCGTATTTTCCGGGGAAAACCGTTATACGAAAGAGCTTTAGTTTTAATAAAATGTTTTGCGGCAGGAGTTATCCTCTCAACATCCTTAGTCCACGTTCTCCCTGACGCGTACGCAGCACTCTCTGATTGCCACGTGGCATCACATCATCCATGGAAGGATTTCCCCTTTTCTGGATTGGTCACTCTTATCGGCGTTATCCTCGCTCTATTCGTGGATCTTGTTGCTAGTTCCCATGTTGAACACGCGCAGTACGCGCCTGTGAGTGCGGGTGAGAAAGAATTAGGAGTTGAACTTGGTGGTGGTGGTGGTGGTGAAGGTGATTGTGAGAGAGGTGAAGAATTGATTAAGTTGAAACAGAGATTGGTATCGCAAGTTTTAGAGATTGGGATAATATTTCATTCAGTGATAATTGGTGTGACTATGGGTATGTCTCAGAATGTTTGTACTATAAGACCTTTGGTTGCTGCTTTGGCTTTTCATCAGATTTTTGAAGGAATGGGTCTTGGTGGTTGTGTTGCTCAGGCAGGATTTAGCTATGGAACAGTGGCGTACATGTGTTTCATGTTTTCAGTAACAACCCCAATGGGGATAATTTTAGGGATGATATTATTCTCATTGACAGGTTATGATGATAGTAACCCAAATGCCTTAATAATAGAAGGGTTATTAGGTTCAATTTCTTCAGGAATTCTAATTTACATGGCTCTTGTTGATCTCATAGCAGCTGATTTCTTTCACAACAAGCTTATCAACTCTGATCCACGTTTGAAAAAGGCTTCTTTTGTTGCCTTAACTATGGGTTCTGCTTCTATGTCTATTCTAGCTCTTTGGGCTTGA 984 0.4299 MATTECSSTDLSRSTSCRDSVAASHLKIISLFVIFITSAIGMSAPVLLARIFRGKPLYERALVLIKCFAAGVILSTSLVHVLPDAYAALSDCHVASHHPWKDFPFSGLVTLIGVILALFVDLVASSHVEHAQYAPVSAGEKELGVELGGGGGGEGDCERGEELIKLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSYGTVAYMCFMFSVTTPMGIILGMILFSLTGYDDSNPNALIIEGLLGSISSGILIYMALVDLIAADFFHNKLINSDPRLKKASFVALTMGSASMSILALWA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03727 327 Pfam ZIP Zinc transporter 165 324 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre10g03727 327 Pfam ZIP Zinc transporter 25 130 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre10g03727 327 NCBIfam ZIP zinc/iron transport family 13 327 IPR004698 GO:0005385|GO:0016020|GO:0071577
Trre10g03727 327 PANTHER ZINC/IRON TRANSPORTER 25 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03727 Trre-Chr10 46707834 46710803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03727 13 327 Inorganic Solute Cotransporters AT2G30080 66.465 6.22e-156 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03727 K14709 - gmx:100797310 488.419