Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03717 ATGGATGATGCTTTACTTGGAGTTGGGTTTGAGAATTTGATATCTCTGCTTCAAAGTGAATTTTCAACCCTTCATGGAATCAGGTCAAAGGCTCAAAAACTATCATCCACCTTGCATCTGATCAAGGTTGTTCTTGAAGATGCTGAGAAGAAACAACTCACAGACCGCTCAGTTAAGGTATGGCTACAACAACTCAAAGATGCTGCATATGTGCTCGATGATATTCTTGATGAGTGTTCCATTAAATCCAATAAACTTAAGGGCTCATCCTCTTTCAAACCTAAGAACATCATGTTTCGCCGTGATATTGGTAAGAAGTTGAAAGATATTACAAAGAGATTTGATGATATTGCAGAAAGTAAGAAAATGTTTCTTCTACGAGAGGGTGTTACTACTGTTATGGAAAGCTCAAGTGAAGTGGCTGAGTGGCGCCAAACAAGATCATTTATTGGTGAACCCAAAGTGTATGGACGAGAAGATGATCAAGAGAAGATTGTCGAGTTTTTACTCACCCAAGCGCGAGGCTCTGAGTTCCTTTCCGTGTATCCCATTGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTTGCTCAATTGGTCTACAATGATCAAAGGGTGAGTAACAATTTTGATACAAAGATATGGGTTTGTGTTTCTGAGGTTTTCGATGTCAACCAGATTTTGTGTTCCATTATAGAGTCTATCACAATAGAAGAGTGTGATGCCTTGGCTTTAGATGAAATACAAAGAAAGGTGCAAGAACTATTGCAAGGTAGGAGATATTTGCTTGTTTTAGATGACGTGTGGAACAAAAATCAAGAACTGGAGTCCGGATTAAGCCAAGAGAAATGGAACAAGTTGAAATCAGTGTTGCCCTATGGATCCAAAGGTAGTTCTTGTTTAGTTTCCACTCGTGATGAGGTTGTTGCATCAATCATGGGAACATACCAAGCTCATCATTTATCTGGCCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCATTTGGAATTGACAGAGAAGAGCATGAAGAGCTTGTGGAAATAGGCAAGGAGATAGCAAAAAAGTGTGGGGGATTGCCTCTTGCTGCACAAGCATTGGGAGGTCTAATGCGCTCAAGGAGGGGAGTAAAAGAATGGCTTGAAATTAAAGAAAGCGGACTTTGGGATTTACCGAGTGACAATTCTGTTTTTCCAGCCTTGAGGTTGAGCTATTCTTATTTAACGCCGACCTTAAAGCAATGTTTTGCTTTTTGTGTTATATTTCCCAAAGATGCAGAAATTTTGAAGGAAGAATTGATTCATCTTTGGATGGCTCATGGATTTATTTCATCTAGGAAAAATTTGGAGGTTGAAGATGTTGGCAGCATGATTTGGAATGAATTATGCCAAAAATCACTCTTCCAAGACATTAAGATTGATGATTATTCAGGAGACATTACTTTCAAGATGCATAATCTGGTCCATGATTTTGCTCAATCAATTATGGGACAAGAATGTTTGTATTTGGAGAATCAAAACATGACTAGTTTGTCAAAAAGTACACACCACATTAGTTTTGACCCTACTAACATGTTGCCACTCAATGAGGATGCCGCCTTAAAGAAAGTTGAATCCTTGCGAACATTGTATCAGTTGAAATACCCCAATAAATCTTTTGGCCTTATCCTAAATAACCGTTCTCTTCGGGTTTTATGCGCAAAGCATTTCCAGTTATCATCACTCAAGAGTTTTATTCATTTAAGATATTTGGAGCTTCATGATCATGATATAGAAACCCTCCCTGACTCAATTTATAGCTTGCAGAAATTGGAAATCTTGAAATTGAAACATTTTTCAGAACTTCGTTGTCTACCAGAACAATTAACTTGCCTAGGGAATCTTAGACATCTTGTCATTGAAGATTGTTATTCATTGTCCCGTATGTTTCCTTATGTTGGAAAATTATCTTCTCTGAGAACATTAAGTGTATATATCGTCAAATTAGAGAGAGGACATAGCTTGGCTGAGTTAAATGATCTAAACCTGGGAGGAAAACTGAGCATTGAAGGCCTAGAAAATGTTGGCAATTTATATGAAGCTCAAGAGGCTAATTTGTTGGGTAAAACATGCCTTTCTGAGTTATGCTTGTCATGGAGCAAAAAGGGTGAAACTGAGACACGTGCTGCTAGTTATGAGCAAGTACTTGAAATGCTTCAGCCTCACTCAAATCTCAAGAGTTTGAAAATATGTTACTATGAGGGATTACGCTTCCCAAGTTGGCTCGGAATTCTCAGTAGTTTAGTTTCTCTTGAGCTTCAGTATTGTAAAAACTGTGCAAGTCTTTCACCAATCGGTAAACTACCATATCTTAAGAAACTCCAATTATTGCATTTGGATGACGTGCAGTATTTGGATGATGAATGTGACAATGGTTTGGAGGTGAGGGCTTTCCCATCTTTGGAGGAACTTTCTTTAGAATGGTTGTTTAACATAGAGAAGTTGCTAAAAGTCGATAGAGGGGGGATGTTCCCGTGTCTTTCTAATTTAAACTTCCACGACTGTCCTAAACTTGAGTTGCCATTCCTTCCATCTGTTAAAGACCTCTTTGTAGTTGGATGCAACAATGAGATACTGAGATCAATCTCTGGTTTCCATGGCCTTAATACTCTTTACCTTGGTGCAGGTAATGGTGCAGGTAAAGAAATGACATCTTTCCCAGCAGGGATGTTGAGAAACCTGTCTTATCTTAAAGATCTGACAGTAGCCGACTTTCCAAAATTGAAGGAATTATCAAATGAACCCTTCAATCTAGCTTTGGAGCACTTTCCGAAATTAAAGGAACTACCAAATGAACCCTTCAATCTAGCTTTGGAGCATTTGCATATCTCATGTTGTTCTGAGTTTGAGTCTTTGCCGGAGCAAATTTGGGAAGGTCTTCGATCACTTCGAACGATGGAAATTACTGGGTGTAAAAAATTGAGATCCTTGCCGAAAGGTATTCGACATCTCACCTCACTTGAGGTTCTGACTATTTATGGATGTCCAGCATTAGAGAGACAACTTAAGGAGAAAACAGGCGAAGACTGGGATAAGATAGCACACATTCCAAAATTAGACATTCGTTAG 3111 0.3864 MDDALLGVGFENLISLLQSEFSTLHGIRSKAQKLSSTLHLIKVVLEDAEKKQLTDRSVKVWLQQLKDAAYVLDDILDECSIKSNKLKGSSSFKPKNIMFRRDIGKKLKDITKRFDDIAESKKMFLLREGVTTVMESSSEVAEWRQTRSFIGEPKVYGREDDQEKIVEFLLTQARGSEFLSVYPIVGLGGVGKTTLAQLVYNDQRVSNNFDTKIWVCVSEVFDVNQILCSIIESITIEECDALALDEIQRKVQELLQGRRYLLVLDDVWNKNQELESGLSQEKWNKLKSVLPYGSKGSSCLVSTRDEVVASIMGTYQAHHLSGLSENECWLLFKQYAFGIDREEHEELVEIGKEIAKKCGGLPLAAQALGGLMRSRRGVKEWLEIKESGLWDLPSDNSVFPALRLSYSYLTPTLKQCFAFCVIFPKDAEILKEELIHLWMAHGFISSRKNLEVEDVGSMIWNELCQKSLFQDIKIDDYSGDITFKMHNLVHDFAQSIMGQECLYLENQNMTSLSKSTHHISFDPTNMLPLNEDAALKKVESLRTLYQLKYPNKSFGLILNNRSLRVLCAKHFQLSSLKSFIHLRYLELHDHDIETLPDSIYSLQKLEILKLKHFSELRCLPEQLTCLGNLRHLVIEDCYSLSRMFPYVGKLSSLRTLSVYIVKLERGHSLAELNDLNLGGKLSIEGLENVGNLYEAQEANLLGKTCLSELCLSWSKKGETETRAASYEQVLEMLQPHSNLKSLKICYYEGLRFPSWLGILSSLVSLELQYCKNCASLSPIGKLPYLKKLQLLHLDDVQYLDDECDNGLEVRAFPSLEELSLEWLFNIEKLLKVDRGGMFPCLSNLNFHDCPKLELPFLPSVKDLFVVGCNNEILRSISGFHGLNTLYLGAGNGAGKEMTSFPAGMLRNLSYLKDLTVADFPKLKELSNEPFNLALEHFPKLKELPNEPFNLALEHLHISCCSEFESLPEQIWEGLRSLRTMEITGCKKLRSLPKGIRHLTSLEVLTIYGCPALERQLKEKTGEDWDKIAHIPKLDIR 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03717 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 420 IPR027417 -
Trre10g03717 1036 Gene3D - 140 317 IPR027417 -
Trre10g03717 1036 Pfam NB-ARC domain 159 386 IPR002182 GO:0043531
Trre10g03717 1036 CDD RX-CC_like 11 119 IPR038005 -
Trre10g03717 1036 FunFam Probable disease resistance protein At1g63360 406 495 - -
Trre10g03717 1036 FunFam Probable disease resistance protein At1g61300 137 317 - -
Trre10g03717 1036 Gene3D Ribonuclease Inhibitor 498 854 IPR032675 -
Trre10g03717 1036 Pfam Rx N-terminal domain 10 96 IPR041118 -
Trre10g03717 1036 SUPERFAMILY L domain-like 840 1012 - -
Trre10g03717 1036 PRINTS Disease resistance protein signature 358 372 - -
Trre10g03717 1036 PRINTS Disease resistance protein signature 254 268 - -
Trre10g03717 1036 PRINTS Disease resistance protein signature 972 988 - -
Trre10g03717 1036 PRINTS Disease resistance protein signature 181 196 - -
Trre10g03717 1036 SUPERFAMILY L domain-like 484 885 - -
Trre10g03717 1036 PANTHER DISEASE RESISTANCE PROTEIN RP 46 849 IPR044974 GO:0006952
Trre10g03717 1036 Gene3D - 405 496 IPR036388 -
Trre10g03717 1036 Gene3D Ribonuclease Inhibitor 855 1022 IPR032675 -
Trre10g03717 1036 Gene3D - 322 404 IPR042197 -
Trre10g03717 1036 Gene3D - 6 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03717 Trre-Chr10 46585898 46589008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03717 184 704 WRKY Transcription Factor Family AT5G45050 23.941 9.30e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03717 - - mtr:11405813 1247.65