Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03716 ATGATTCCATTGATTGAAAATCAATCAACCAATGTTTGTATGGTAGGCATCTGGGGAATGGGAGGATTGGGTAAAACTACCACAGCCAAAGCCATCTACAATCAAATTCATCGCAAATTTGTGTATAGAAGTTTCATTGAAAATATTGGAGAAACTTGTGAAACGGGTAATAGAGGCCAATGGCATATTCATTTACAACAACAACTTCTTTCAGATCTCCTCAAAACAAAGGAGAAGATACACAGCATTGCCTCTGGAACAATTGCAATCAAGAAAATTCTCTCTGCGAAAAAGGTACTCATTGTACTTGATGATGTGACCAAAGTAGAACAAGTTAAAGCCCTATATGGAAGTCGTAAGTGGTTTGGATCAGGAAGTGTAATAATTGTTACAAGCAGGGATAAACGCATACTTACGTCACTTCAAGTTGACCATGTCTATACAGTTGCCGAAATGGACCCAAAAGAGTCCCTTGAGCTTTTCTGTTGGCATGCTTTTAAAAAGGCAGGTCCAAGAGCAGACTTCAGTGAGCTCTCAAGAAATGTAACTACTTACTGTGGAGGATTACCCTTAGCTGTTGAAGTCATTGGATCTTACTTATATGACAGGGAGATAGATGAATGGACAAGTGTGTTATCAAAACTAAAGGTAATTCCCGACCAAGAAGTGCACGAGAAACTAAGAATAAGCTACGATGGTCTAAGAGATGGCAAGGAAAAGGATATATTTCTTGACATATGTTGTTTCTTTATCGGCAAGGACATAACCTATGTTACTGAGATACTAAATGGCTGTGACCTTTTTCCTGGTATCGGAATACCTGTCCTCATAGAGCGGAGTCTCCTAAAAGTTGACAAAAATAACAAGCTTGGAATGCATGATCTAATAAGAAACATGGGAAGAGAAATTGTCCGCCAAAATTCAGAAAAAGATGCTCGCCTAATTTTAGAAAAAGATCCAGGGGAGTGCAGTCGGTTGTGGCTTCAGAAAGATGTACTTGGTGTTTTGACAAACAATACTGGAACACAAACTGTTGAGGGCTTGATTTTAAACTTAGAAAGAACAAGCAGAGTTAGCTTCAATACTAGTGCTTTCCAGGAGATGAAGAAACTGAGACTTTTACAACTTGATTGTGTTGACCTCACCGGAGATTTTGGGTTTCTTTCCAAACAACTGAGATGGGTCAATTGGCAACAATCTACCTTCAACTGTATACCCAACAACTTTTATCAAGGAAATGTAGTTGTTTTTGAATTAAAATATAGCATGGTTAAACAAGTTTGGAAGGAGGCTCAGTTGTTGGACAAGCTAAAAATTCTCAACCTCAGTCATTCCAAGTTGTTGAAAACCACCCCTAACTTTTCATTATTACCTAGTCTAGAAAAGCTCATTATGAAGGATTGTCCAAGTTTGACCAAGGTACACCCATCCATTGGAGATCTCAAGAATCTTCTTCTGATAAATTTTAAGGATTGTACAAGTCTTGGAAATCTCCCAAGAGAGATCTATCAGTTGACGTCTGTCACAACTCTCATCCTTTCTGGTTGTTCAAACATTAATAAATTTGATGAAGATATAGTCCAAATGAAATCCTTGAGAACTTTAATCGCAGCAAAAACTGGTGTCAAACAAGCGCCCTTTTCCATAGTTAGATTAAAAAGCATCATGTATATATCCCTGTGTGGATATGAAGGACTTTCATGTGATGTTTTTCCTTCTCTCATATGGTCTTGGATGTCACCAACAATGAATTCCTTACCACATAGCCCCCACATTTCCTTGGATGTAGAAAGTAATAATTTGGGTTTGGGCTATCAATTGCCAATGGCCAGAAGCTGTTCAACATTTAGAGGTGTTTGGATACAATGCAGCTCCGAGATTCAACTAAATGAAGAATTAAAAAGATTGGTTAATGATCTAAACAGTGTGGATTTTTCTGAATCAGAAACTTCACATGCATCACAAATCTCAGATCTGTCATTGAAATCCCTTTGGATTACTCTTGGCAGCAAGAGCTTATCACAGGGATTAACAACCAGTGGTTCTGGTGATTGTTTCCTTCCAGTAGACAATTATCCTTCTGGGTCATCATTTTATACATGTACAGGACCTTCAGTACATTTTCGAGTGCCTGAGGATAGTGATTGTTGCATGAAGGGAATAACTTTATGTGTTGTATCTGAAAACATGTCAAGTGAATGTCTCGTTGGTGTTTTGATTATTAATTATACAAAACTCACCATGGATATATACAAGCAAGACACGGTAATGTCATTTAATGATGAAGATTGGCAGGATGTAAAATCAAATTTAGGAGCTGGCGACAATGTGGGGATTTTTGTTGTTTTAGGGCATGGTTTCACTGTTAAGGAGACAGCCGTCTATCTAATACATGGACAATCAAGTACTATGGGAATTGAATCATCAATTACCATGGAAGTTGAGAAATCTATTATGGTAAAAATGGAGCCATTGCCCGAAGTGGAACTGCAAACACCACCTAATGTGAAAATAGAACCATCATCACCTGAAGACGAAGTACGACCATCACATATTGTCCAGCAGCCAAATAAAAGTATCTTTGTAAACTTTGCAAAGAGAGTTTGTAAATGTGCATGCTTGAAACCAGAATAG 2634 0.3793 MIPLIENQSTNVCMVGIWGMGGLGKTTTAKAIYNQIHRKFVYRSFIENIGETCETGNRGQWHIHLQQQLLSDLLKTKEKIHSIASGTIAIKKILSAKKVLIVLDDVTKVEQVKALYGSRKWFGSGSVIIVTSRDKRILTSLQVDHVYTVAEMDPKESLELFCWHAFKKAGPRADFSELSRNVTTYCGGLPLAVEVIGSYLYDREIDEWTSVLSKLKVIPDQEVHEKLRISYDGLRDGKEKDIFLDICCFFIGKDITYVTEILNGCDLFPGIGIPVLIERSLLKVDKNNKLGMHDLIRNMGREIVRQNSEKDARLILEKDPGECSRLWLQKDVLGVLTNNTGTQTVEGLILNLERTSRVSFNTSAFQEMKKLRLLQLDCVDLTGDFGFLSKQLRWVNWQQSTFNCIPNNFYQGNVVVFELKYSMVKQVWKEAQLLDKLKILNLSHSKLLKTTPNFSLLPSLEKLIMKDCPSLTKVHPSIGDLKNLLLINFKDCTSLGNLPREIYQLTSVTTLILSGCSNINKFDEDIVQMKSLRTLIAAKTGVKQAPFSIVRLKSIMYISLCGYEGLSCDVFPSLIWSWMSPTMNSLPHSPHISLDVESNNLGLGYQLPMARSCSTFRGVWIQCSSEIQLNEELKRLVNDLNSVDFSESETSHASQISDLSLKSLWITLGSKSLSQGLTTSGSGDCFLPVDNYPSGSSFYTCTGPSVHFRVPEDSDCCMKGITLCVVSENMSSECLVGVLIINYTKLTMDIYKQDTVMSFNDEDWQDVKSNLGAGDNVGIFVVLGHGFTVKETAVYLIHGQSSTMGIESSITMEVEKSIMVKMEPLPEVELQTPPNVKIEPSSPEDEVRPSHIVQQPNKSIFVNFAKRVCKCACLKPE 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03716 877 Gene3D - 2 146 IPR027417 -
Trre10g03716 877 Gene3D - 152 235 IPR042197 -
Trre10g03716 877 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 566 IPR044974 GO:0006952
Trre10g03716 877 Gene3D Ribonuclease Inhibitor 348 680 IPR032675 -
Trre10g03716 877 PRINTS Disease resistance protein signature 93 107 - -
Trre10g03716 877 PRINTS Disease resistance protein signature 186 200 - -
Trre10g03716 877 PRINTS Disease resistance protein signature 14 29 - -
Trre10g03716 877 PRINTS Disease resistance protein signature 432 448 - -
Trre10g03716 877 SUPERFAMILY L domain-like 292 578 - -
Trre10g03716 877 Pfam NB-ARC domain 4 217 IPR002182 GO:0043531
Trre10g03716 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 246 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03716 Trre-Chr10 46579901 46584208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03716 4 551 WRKY Transcription Factor Family AT5G45050 31.469 1.25e-67 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03716 - - tpra:123923836 1028.08