Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03713 ATGACTTGCTCCGTCGCAGTTTCGAATTCACCGGTGTTTTCACCTTCATCATCTCTCTTCTGCAACAAATCTTCAATCAAATCTTCTTCTTCTGAAACTCTAACGTTATCTCTTTCTCATCTCAAACCTATTAACTCTTCTTCTTCAACTTGTTCTTCTCCTTCTCCTTGTTCTTCACCTTCTTCACCCTTTTGTCTTCGATTACCGAAACTACCCTCGGTTTTTTCATCCAATAATAACAACAACTCTGCGTCTTCAAATGATGCTGTTTTGAAGAGGAAACGACCTACAAGGCTTGATATACCTGTTTGTTCTTCTCTTGCTTTTGGTGTTCCGGCGACTCCATCTGCGGTGGCGCGTGATGTTGTTGAAGCTGAAGGAGATGGGTATTCTGTTTATTGTAAGAGAGGAAGGAGAGAGTATATGGAAGATCGTTTTACTGCTGGAGATAATCTTCGCGGTGAACACAATTTGGCTTTTTTTGGAGTATTTGATGGCCATGGAGGTGCCAAAGCTGCTGAATTTGCGGCAAATAACTTAGAAAAGAACATCTTGGATGAGGTGATCGTGAGTGATGAAGAAGATGTTGAGGAGGCTGTGAAGCGCGGTTACCTCAATACCGATTCTGAGTTCATGAAAAAAGATCTTCATGGTGGATCTTGTTCTGTAACAGCATTGATTAGGAATGGTAACTTAATTGTATCTAACGCCGGTGATTGCCGTGCTGTCATTAGTAAAGGAGGTGTTGCAGAGGCCCTAACATCTGATCACCGACCTTCGAGGGAAGACGAAAGGGACAGAATTGAATCCCTGGGTGGTTATGTTGATTTATGTCGCGGTGTTTGGAGGATTCAAGGATCTCTTGCTGTATCTAGAAGTATCGGAGATCGACACCTGAAACAATGGGTTACAGCTGAACCCGAGACTAAAGTTATCAGAATTGAACCTGAACATGACTTGTTAATATTAGCTTCAGATGGATTATGGGATAAGGTTAGTAACCAGGAAGCAGTAGACATTGCTCGTCAAGTCTGCGAAGGAAACAACAAACAACAAGCATTGTTAGCCTGTAAAAAGCTTGCAGAGTTGGCTGTTTCACGCGGCTCTTTGGATGATACAAGTGTTATGCTGATCAAATTGAAACAATATATTTAA 1155 0.4182 MTCSVAVSNSPVFSPSSSLFCNKSSIKSSSSETLTLSLSHLKPINSSSSTCSSPSPCSSPSSPFCLRLPKLPSVFSSNNNNNSASSNDAVLKRKRPTRLDIPVCSSLAFGVPATPSAVARDVVEAEGDGYSVYCKRGRREYMEDRFTAGDNLRGEHNLAFFGVFDGHGGAKAAEFAANNLEKNILDEVIVSDEEDVEEAVKRGYLNTDSEFMKKDLHGGSCSVTALIRNGNLIVSNAGDCRAVISKGGVAEALTSDHRPSREDERDRIESLGGYVDLCRGVWRIQGSLAVSRSIGDRHLKQWVTAEPETKVIRIEPEHDLLILASDGLWDKVSNQEAVDIARQVCEGNNKQQALLACKKLAELAVSRGSLDDTSVMLIKLKQYI 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03713 384 Gene3D - 120 384 IPR036457 -
Trre10g03713 384 CDD PP2Cc 129 380 IPR001932 -
Trre10g03713 384 SUPERFAMILY PP2C-like 130 381 IPR036457 -
Trre10g03713 384 Pfam Protein phosphatase 2C 130 372 IPR001932 -
Trre10g03713 384 PANTHER PROTEIN PHOSPHATASE 85 379 IPR015655 GO:0004722|GO:0006470
Trre10g03713 384 FunFam probable protein phosphatase 2C 25 122 383 - -
Trre10g03713 384 ProSitePatterns PPM-type phosphatase domain signature. 160 168 IPR000222 GO:0043169
Trre10g03713 384 ProSiteProfiles PPM-type phosphatase domain profile. 129 380 IPR001932 -
Trre10g03713 384 SMART PP2C_4 119 378 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03713 Trre-Chr10 46518360 46520398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03713 1 384 PP2C-type Phosphatase Gene Family AT2G30020 63.409 8.59e-162 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03713 K17506 - gmx:100797934 562.762