Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03711 ATGGAAATTGAATTAATTTCTAGAGAAACCATTAAACCTTCGATACCAACTCCTTCTCACCTTAGAATATATCCACTTTCTTTCATAGACAACATTATGTTCCGTACATACGCACCAACAATTTTCTTTTACAATCCAAACGATGGTATTGATCAAAATACAATAATATCACAACTCCGAAAATCTTTATCTCATCTTCTATCAAAATATTATCCTTTTGCCGGAAGATTGAAAGATAAAATTACCGTCGAATGTAATGATCAAGGTGTATCATTTCTCGTCACAAAGATAAAAAACAAACTTTCAGAAATCCTCCAAAACCCTACAGATAAGTTGTTGAACCTTTTGTTCCCCAATCAATTGCAATGGACAAATATGGATTGGAATGGAACCATAATGTTGTTTCAAATCAATTCTTTTGCATGTGGAGGAATAGCAATTAGTACTTGTGTGTGTCACAAATTTAGTGATGTTGCAACTTATTACAATTTCATGCATGATTGGACCATCATTAACCGAAGAGTAGTAGAAGAAAAAGAGTTGTTAATATTACCCGTTTCTTTACTTGATGGAGGAGCTTCGGTTTTTCCACAAAAAGATTTACCTATTTTTCCAGAATTGTTGTTTAAGAGACAAAACAATGTGGTGTGTAAAAGGTTTATTTTTCAACCCTCAATGATTAGGTTTCTCAATGAAGAGGTAACTTCTAGTTCCATGCTTTCTTCCACACATACACTCGTTGTAATCGCGTGGATTTACAAGTGTGTGGTTTCAGTAATGGGATTAGATTTCAAGACAGCGTTGTTAAACATGCCTGTAAATCTTCGCAAATTAATGATTCCTCCATTGTCTGAAAAGTGTGTAGGCAATATAATTTGGTTCTTGAGTATATTTGCTGATAAGAACGAAATCGAATTGAAAGATTTGGTATGCAAAATAAAACAAGGGTTATCAGAATTTAGTGACGTTGTTCCAAAAATATTTGGAGAAAAGGGGAACGATAACTTGCCATCGATATCCGAGTTCTTGAAACAAGTTACTGAGCCTCATCCCGAGCTTCCGGAAAATAATATCATTACTTTTACTAGTTGGTGTAGGTTACCAATATATGAACTAGATTTCGGTTGGGGAAAACCAACATGGTTCACCACTTGCGGTTGTTCTTCCAAGAATTTCATAATTTTGATGGATACAAAAGATGTAAATGGGATTGAAGTGGTAGTGAATTTGGAAGAGAATGTTATGGCTAAATTTGAGCATGAAGTGGAGCTTCTTCAATATGCTTCACTTAATCCACAGAAAAATAGTATACCTTTACAGTTTGTTGGGTGTGAAATTGGGTCCACTAATGTCTGA 1356 0.3451 MEIELISRETIKPSIPTPSHLRIYPLSFIDNIMFRTYAPTIFFYNPNDGIDQNTIISQLRKSLSHLLSKYYPFAGRLKDKITVECNDQGVSFLVTKIKNKLSEILQNPTDKLLNLLFPNQLQWTNMDWNGTIMLFQINSFACGGIAISTCVCHKFSDVATYYNFMHDWTIINRRVVEEKELLILPVSLLDGGASVFPQKDLPIFPELLFKRQNNVVCKRFIFQPSMIRFLNEEVTSSSMLSSTHTLVVIAWIYKCVVSVMGLDFKTALLNMPVNLRKLMIPPLSEKCVGNIIWFLSIFADKNEIELKDLVCKIKQGLSEFSDVVPKIFGEKGNDNLPSISEFLKQVTEPHPELPENNIITFTSWCRLPIYELDFGWGKPTWFTTCGCSSKNFIILMDTKDVNGIEVVVNLEENVMAKFEHEVELLQYASLNPQKNSIPLQFVGCEIGSTNV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03711 451 Coils Coil 446 451 - -
Trre10g03711 451 PANTHER F21J9.9 4 429 - -
Trre10g03711 451 Pfam Transferase family 1 424 - -
Trre10g03711 451 Gene3D - 212 429 IPR023213 -
Trre10g03711 451 Gene3D - 1 203 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03711 Trre-Chr10 46498181 46499536 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03711 1 419 Monolignol Biosynthesis Gene Families AT5G48930 22.523 2.10e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03711 - - gmx:100806928 443.736