Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03708 ATGTCCTTTCAACTAGGTCAAGTTCCAGCTATTATCATTTCATCTTCAAAAGCAGCTGAATCATTCCTTAAAACACATGACATCAATTTTGCAAGCAGACCAAAGGTTACAGCATCTGAACTCTTGTCTTATGGATCTAAAGGGATTGCTTTTTCTGAGTATAGTCCTTATTGGCGTAGTATGAAAAAACTTTGCACTGTAAAACTTCTTAGTGCTTCAAAAGTTGAGATGCTTGGTCCTATTAGGAAGGAGAAGTTGGATGTTTTGGTTAAATCCATAAAAGCTGCTTTGGTAGGTGAAGTTGTTAATATTAGTGAGGTTGTAGCAAATCTTATTGAAGATATTATGTATAAGATGATGTTGGGTAGGAGTAAGTATGAACAATTTGACTTAAAGAAGTTGGTTCAAGAAGCAACAAATTTGTATGGAGCTTTTAATCTTGCTGATTATGTTCCTTGGTTAGGTGCACTTGATTTTCAGGGGTTAACACGATCGTGCAAGAAAACGAGTAAATCACTTGATGTGGTGTTGGAAGTGATATTAAAAGATCATGAACATATTTCTAATTTAGACAAAACTCATCATGAAGACTTCGTCAACATACTTCTTTCAAATATGAACAAAGCCATCGATCCAGAAAATGATCAAAATCATGTTATTGATCGAAGTAACGTTAAAGCAGTTTTACTAGACATGATTGTGGCAGCAATTGATACATCAGCTACCACAATTGAATGGGCCTTAACCGAACTTCTGAGGCACCCAAGAGTGATGAAAAATCTTCAAGATGAGATACAAAATGAAGTTGGAACTAAAAGAATGGTTGAAGAAAAGGATTTGAAGAAGTTTAATTACTTAGATATGGTGATTGATGAAACGTTAAGATTATATCCCGTTGCACCTTTACTAGTCCCTCGTGAATGCGGAGAGAGCATAACAATTGATGGTTATTTTATTAAGGAAAAGACACGAGTTATAGTAAATGCATGGGCTATAGGGAGAGATTCAAATGTTTGGTCAGATAATGTTGAAGAATTTTATCCGGAGAGATTCATTAACAAGAAAATGAATTATCTAGGACAAGATTTTGAATCTATACCTTTTGGTGCTGGTCGTAGACGTTGTCCTGGAATTCAATTGGGTTTAGTTAGTGTTAAATTGGTTTTAGCTCAATTGGTGCATTGTTTTAATTGGAAACTTCCCAATAATATCAATCCTTCCAATTTAAATATGGAGGAGAAATTTGGACTCTCTATACCAAGAGCTCAACACTTGCATGCAATTCCAAGTTACCGTTTGTCATGTGATGTCAATTGTCAAGCATGA 1326 0.3507 MSFQLGQVPAIIISSSKAAESFLKTHDINFASRPKVTASELLSYGSKGIAFSEYSPYWRSMKKLCTVKLLSASKVEMLGPIRKEKLDVLVKSIKAALVGEVVNISEVVANLIEDIMYKMMLGRSKYEQFDLKKLVQEATNLYGAFNLADYVPWLGALDFQGLTRSCKKTSKSLDVVLEVILKDHEHISNLDKTHHEDFVNILLSNMNKAIDPENDQNHVIDRSNVKAVLLDMIVAAIDTSATTIEWALTELLRHPRVMKNLQDEIQNEVGTKRMVEEKDLKKFNYLDMVIDETLRLYPVAPLLVPRECGESITIDGYFIKEKTRVIVNAWAIGRDSNVWSDNVEEFYPERFINKKMNYLGQDFESIPFGAGRRRCPGIQLGLVSVKLVLAQLVHCFNWKLPNNINPSNLNMEEKFGLSIPRAQHLHAIPSYRLSCDVNCQA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03708 441 Coils Coil 258 278 - -
Trre10g03708 441 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 PRINTS E-class P450 group I signature 375 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 PRINTS E-class P450 group I signature 287 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 PRINTS E-class P450 group I signature 224 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 PRINTS E-class P450 group I signature 244 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 PRINTS E-class P450 group I signature 365 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 Gene3D Cytochrome P450 1 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 CDD CYP71-like 1 425 - -
Trre10g03708 441 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 368 377 IPR017972 GO:0005506|GO:0016705
Trre10g03708 441 Pfam Cytochrome P450 2 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 SUPERFAMILY Cytochrome P450 2 431 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 PRINTS P450 superfamily signature 366 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 PRINTS P450 superfamily signature 288 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 PRINTS P450 superfamily signature 235 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03708 441 PANTHER CYTOCHROME P450 93A3-LIKE 1 433 - -
Trre10g03708 441 FunFam Cytochrome P450 83B1 1 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03708 Trre-Chr10 46484515 46487225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03708 4 435 Monolignol Biosynthesis Gene Families AT4G36220 37.978 9.20e-107 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03708 - - psat:127113357 639.417