Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03701 ATGGCCGAGGCTTTACTTGGATTTGCTTTCGAGAATGTGATGTCTGTACTTCAAGGTGAATTGTCCACAATGTTTGGAATCAGGTCAAAGGCTGAAAAGCTATCAACCACCTTGGATCTGATCAGGGCTGTTCTTGAAGATGCTGAGAAGAAACAACACACAGACCGCGCTATTAAGGTATGGCTACAACAACTCAAAGATGCTGTATATGTGCTGGATGATATTCTTGATGAGTGTTCTATTAAATCCAATCGACTTAAGGGCTCATCAGCTTTCAAACTAAAGAATATCAATTTCCGCCGTAACATTGGAAACAGGTTGAAAGAAATTACAAGCAGATTTGATGAAATTGCAGAGAGGAAGAAACAGTTTCTTCTACAAGAGGGTGTTACTGCTAAGGAAATGACAGCTGAAGTGGCTGAATGGCGTCAAACTTGCTCAATTATTGCTGAACCTAAGGTGTACGGACGGGAAGATGATAAACAGAAGATTGTTGAGTTTCTTCTCAACCAAGAGAGGGACTCTAACTCCCTTTCCGTCTACCCCATTGTTGGCTTAGGTGGTGTTGGAAAAACAACTCTCACTCAATTGGTCTACAATGATCAAAGGGTGAGTACCAATTTTGACACAAAGATATGGGTTTGCGTTTCTGAAGCTTTCTCGGTCAAGAGGATTCTATGTTCCATTATAGAATCTATCAAAAGTGAGAAATGTGATGCCTTGGATTTAGATGTAATACAAAGAAAGGTGCAAGAACTATTGAAAGATAAAAGACTTTTGCTAGTTTTAGATGACATTTGGAACAAAAATGAAGAACTAAAATTCGGATTGAGCCATGAGAAATGGAACCAGTTGAAAGCAGTGTTGTCCAGTGGATCCAAAGGTAGTTCTTGTTTAGTTTCCACTCGTGATGAGGTTGTTGCGTCAATAATGGGATCATGTCAAGCTCATCATTTGTCTGGTCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCATTTGGACATGACAAAGAAGAGAAAGTAGAGCTCGTGGAAATAGGCAAGGATATAGCAAAAAAGTGCGGGGGATTGCCTCTTGCTGCACAAGCATTGGGAGGGTTAATGCACTCACGGAGTGGAGAAAGAGAATGGCTTGAAATTAAAGAAAGTAGACTTTGGGATTCACATAGTGACAATTCTATTTTGCCAGCCTTGAGGTTGAGCTACTCTTATTTAACGCCAACCTTAAAGCAATGTTTCTCTTTTTGTGCTATGTTTCCCAAAGATACTGAAATCCGGAAGGAAGAATTAATTCATCTTTGGATGGCTAATGGATTTATTTCATCTAGGAAAAATTTGGAGGTTGAAGATGTTGGCAGCATGATTTGGAATGAATTGTGCCAAAAATCATTCTTTCAAGACATTAAGATGGATGAATATTGTGAAGCCATTTCATTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAGTAATGGGGCAAGAATGTTTGTATTTGGAGGATGCAAACATGTCTGGTTTGTCAAAAGGCACACATCATATAAGTTTTTACTCAGGTGGCTCTTTATCATTCAATGAAGATGCTTTCAAAAAAGTAGAATCCTTGCGAACATTGTTTCAATTGAACCGAGATAGTAAAAACCCTCATTATGTCCCAATAAACCGCTTTCTTCGGGTTTTATGCACATCCTTTATCCACATACCATCAATAGGGAGTTTAATTCATTTGAGTTTAGAGCCAGGTAATAGTTTGGCAGAATTACGTGATCTAAACCTCGGTGGAGAATTGAGTATCGAAGGCTTGAATAATGTTGGCAGTTCATCTGAAGCTCAAGAAGCCAATTTGATGTGTAAAAAAAACCTCCAAGAATTATGCTTGTCATGGAAAAGTAGAAGTGATGAATCTACAAAGACCCCTGCTATTAATGTTGAGCAAGTACTTGAAGTGCTTCAACCTCACTCAAATCTCAAGAAGTTAGAAATAGATTACTATGAAGGAATATTGTTACCAAGTTGGATAAGTATTCTTAGTAACTTAGTTTCTCTTATACTTAGGGATTGCAAGAAATGTGTGCGGCTTCCATCAATTGGTAAAATACAATCTCTAAAAACACTGGAATTAGAGAATATGGATAATCTGAAATACTTAGATGATGAATGTCAAGATGGTATGGAGGGGAGGATTTTCCCATCTCTGGAGGAACTCTTTTTAAGCAACTTACCAAAGATAGAAGGGTTATTGAAAGTGGAAAGAGGGGAGATGTTTCCTTGTCTTTCTCAATTGGTAATCATCAACTCTTGCCCTAAACCTGGATTGCCATGTCTTCCATCTCTTAAACACCTCGCTGTCAGAGGATGTAACAATGGGTTACTGAGGTCAATCTCTACCTTCTACGGTCTTACCCATCTTAACCTTTCTAGAGACAATGAAGGAATAACATCCTTCCCAGAGGGGATGTTCACAAACCTTACTTTTCTTAAAACTCTGACAATATGTGATTTCCCGAAATTGAAGGAGTTGCCAAATGAACCCTTTAACCTAGCTTTAGAGCATCTCTCTATCATTGACTGCTGTGAGCTTGAGTCATTACCAGAGCAAATTTGGGAAAGTCTACAATCCCTTCAACTTCTAAATATTTGGAATTGTAAAGGATTGCGATGCTTGCCTGAGGAGGGTATTCAAAACCTCACTTCTCTTGAGACTCTGTCGATTCAGAATTGTAAAGGTTTGCGATGCTTGCCGGAGGGTATTCGAAACCTCGCTTCTCTTGAGACTCTATCGATTTTTCATTGTAAAGGTTTGCGATGCTTGCCGGAGGGTATTCGACACCTCACTTCTCTTGAGAGTCTGAGAATTGATGAATGCCCAACATTAGAGGAACGATGCAAGGAGGGAACAGGGGAGGACTGGGACAAGATTGCACATATTCCATACCTAACGATTGGGTGGTGA 2964 0.3924 MAEALLGFAFENVMSVLQGELSTMFGIRSKAEKLSTTLDLIRAVLEDAEKKQHTDRAIKVWLQQLKDAVYVLDDILDECSIKSNRLKGSSAFKLKNINFRRNIGNRLKEITSRFDEIAERKKQFLLQEGVTAKEMTAEVAEWRQTCSIIAEPKVYGREDDKQKIVEFLLNQERDSNSLSVYPIVGLGGVGKTTLTQLVYNDQRVSTNFDTKIWVCVSEAFSVKRILCSIIESIKSEKCDALDLDVIQRKVQELLKDKRLLLVLDDIWNKNEELKFGLSHEKWNQLKAVLSSGSKGSSCLVSTRDEVVASIMGSCQAHHLSGLSENECWLLFKQYAFGHDKEEKVELVEIGKDIAKKCGGLPLAAQALGGLMHSRSGEREWLEIKESRLWDSHSDNSILPALRLSYSYLTPTLKQCFSFCAMFPKDTEIRKEELIHLWMANGFISSRKNLEVEDVGSMIWNELCQKSFFQDIKMDEYCEAISFKMHDLVHDLAQSVMGQECLYLEDANMSGLSKGTHHISFYSGGSLSFNEDAFKKVESLRTLFQLNRDSKNPHYVPINRFLRVLCTSFIHIPSIGSLIHLSLEPGNSLAELRDLNLGGELSIEGLNNVGSSSEAQEANLMCKKNLQELCLSWKSRSDESTKTPAINVEQVLEVLQPHSNLKKLEIDYYEGILLPSWISILSNLVSLILRDCKKCVRLPSIGKIQSLKTLELENMDNLKYLDDECQDGMEGRIFPSLEELFLSNLPKIEGLLKVERGEMFPCLSQLVIINSCPKPGLPCLPSLKHLAVRGCNNGLLRSISTFYGLTHLNLSRDNEGITSFPEGMFTNLTFLKTLTICDFPKLKELPNEPFNLALEHLSIIDCCELESLPEQIWESLQSLQLLNIWNCKGLRCLPEEGIQNLTSLETLSIQNCKGLRCLPEGIRNLASLETLSIFHCKGLRCLPEGIRHLTSLESLRIDECPTLEERCKEGTGEDWDKIAHIPYLTIGW 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03701 987 FunFam Probable disease resistance protein At1g61300 136 316 - -
Trre10g03701 987 Gene3D - 411 494 IPR036388 -
Trre10g03701 987 PRINTS Disease resistance protein signature 180 195 - -
Trre10g03701 987 PRINTS Disease resistance protein signature 898 914 - -
Trre10g03701 987 PRINTS Disease resistance protein signature 253 267 - -
Trre10g03701 987 PRINTS Disease resistance protein signature 357 371 - -
Trre10g03701 987 Gene3D Ribonuclease Inhibitor 498 772 IPR032675 -
Trre10g03701 987 SUPERFAMILY RNI-like 734 962 - -
Trre10g03701 987 CDD RX-CC_like 2 119 IPR038005 -
Trre10g03701 987 FunFam Probable disease resistance protein At1g63360 405 494 - -
Trre10g03701 987 Gene3D - 137 317 IPR027417 -
Trre10g03701 987 Pfam NB-ARC domain 157 406 IPR002182 GO:0043531
Trre10g03701 987 Gene3D - 6 122 - -
Trre10g03701 987 Pfam Rx N-terminal domain 6 93 IPR041118 -
Trre10g03701 987 Gene3D - 321 409 IPR042197 -
Trre10g03701 987 Coils Coil 31 51 - -
Trre10g03701 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 419 IPR027417 -
Trre10g03701 987 Gene3D Ribonuclease Inhibitor 773 969 IPR032675 -
Trre10g03701 987 PANTHER DISEASE RESISTANCE PROTEIN RP 36 869 IPR044974 GO:0006952
Trre10g03701 987 SUPERFAMILY L domain-like 469 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03701 Trre-Chr10 46392296 46395496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03701 183 579 WRKY Transcription Factor Family AT5G45050 24.113 3.15e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03701 - - mtr:11405813 892.108