Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03679 ATGTCTTTTGTAGCAACAATAACAATTGTTTTCCTTTTCTTCATTTTCTCATTCTTTTTATGCAAATTCTTACATCCCAAAAAAAAAACTAAGCCACCAGGTCCACTAGCACTACCAATAATCGGAAACCTTCACATATTAGGCAAACTTCCACAACGAAAACTTGAATCACTCTCCAAAAAATATGGTCCAATCATGTCATTACAACTTGGTCAAGTTCCAACTATTATCATTTCATCTTCAAAAGTTGCAGAATCATTCCTCAAAACCCATGACATTGCATTTGCAAGTTGGCCGAGGATTCAAGGATCTGAGCTAATGTCTTATGGTTCTAAAGGGTTGGCTTTTTCTGAGTATGGTCCTTATTGGCGTAGTGTGAGGAAATTTTGCACTTTGAATCTTCTAAGTGCTTCGAAAGTTGAGATGTTTGGTCCTATCAGGAAACAAGAGTTGGATGTTTTAGTTAAATCTTTGGAGAAAGCCGCTTTGGTAGGTGAGATTGTGAATGTTAGTGAGGTTATACGAAATCTTATTGAGGATATTGTGTATAAGATGGTGTTAGGTAGGAGTAAGCATGAACAATTTGACGTGAAAAAGTTGGTTCAAGAAGGATTGGCTTTGATGGGAGTTTTTAATCTGGCTGATTATGTTCCTTGGTTAAGTGTTTTTGATCTTCAGGGATTAACAAGAGCTTGCAAGAAAGTAAGTAAATCCATTGATGAGGTGCTGGAAGTGATCATGACAGAGCATGAGCAAGCTATTAATGTAGACAAAAATCGTCATGAAGATTTCGTAGACATACTTCTCGCAATTATGCACCAAAGAATCGATCACGAAAATGAACAAAATCTTGTCATTGATCGAACTAATGTCAAGGCTATTTTACTTGACATGATAGTTGCAGCAAATGATACATCTGCTACCTCGATTGAGTGGATTTTGTCTGAACTTTTAAGACATCCAAGAGTGATGAAAATTCTTCAAGAAGAAATACAAAATAAAGTAGGAAATAAGAGAATGGTTGAAGAGAAGGATTTGAAGAAGTTGAATTACTTAGATATGGTAATCGATGAAACCTTAAGACTGCATCCCGTTGGACCCTTATTACTCCCTCGTGAATGTAGAGAGAGTATAACAATTGATGGTTATTTTATAAAGGAAAAGACACGAGTTATAGTAAATTCATGGGCAATAGGGAGAGATCCTAATGTTTGGTCAGAAAATGCTGAAGAATTTTATCCAGAAAGATTTATTAACAAGAAAATAAATTATCAAGGACAAGACTTTGAATCTATACCGTTTGGTTCTGGTCGTAGGCGTTGTCCTGGAATTCAATTAGGTTTAACTACAATTAAGTTGGTCATAGCTCAATTGGTACATTGCTTTAATTGGGAACTTCCATGTAATATTAGTCCTTCCAATTTGAATATGGACGAGAAATTTGGACTCTCTATGCCTAGAGCTCAACACTTGCATGTAATACTCAGGTATCGTTTGGCTGATCAGCACGAATAG 1515 0.3597 MSFVATITIVFLFFIFSFFLCKFLHPKKKTKPPGPLALPIIGNLHILGKLPQRKLESLSKKYGPIMSLQLGQVPTIIISSSKVAESFLKTHDIAFASWPRIQGSELMSYGSKGLAFSEYGPYWRSVRKFCTLNLLSASKVEMFGPIRKQELDVLVKSLEKAALVGEIVNVSEVIRNLIEDIVYKMVLGRSKHEQFDVKKLVQEGLALMGVFNLADYVPWLSVFDLQGLTRACKKVSKSIDEVLEVIMTEHEQAINVDKNRHEDFVDILLAIMHQRIDHENEQNLVIDRTNVKAILLDMIVAANDTSATSIEWILSELLRHPRVMKILQEEIQNKVGNKRMVEEKDLKKLNYLDMVIDETLRLHPVGPLLLPRECRESITIDGYFIKEKTRVIVNSWAIGRDPNVWSENAEEFYPERFINKKINYQGQDFESIPFGSGRRRCPGIQLGLTTIKLVIAQLVHCFNWELPCNISPSNLNMDEKFGLSMPRAQHLHVILRYRLADQHE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03679 504 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 Pfam Cytochrome P450 32 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 Coils Coil 324 344 - -
Trre10g03679 504 CDD CYP71-like 61 491 - -
Trre10g03679 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Trre10g03679 504 FunFam Cytochrome P450 83B1 19 494 - -
Trre10g03679 504 Gene3D Cytochrome P450 22 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 SUPERFAMILY Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03679 504 PANTHER CYTOCHROME P450 93A3-LIKE 7 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03679 Trre-Chr10 46216208 46218643 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03679 12 494 Cytochrome P450 AT3G48280 38.017 1.39e-122 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03679 - - psat:127113357 762.296