Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03678 ATGTCTTCTACATCAATAACAATACTTGTTTTTCTTCTCTTCACTTTCACATATCTTTTATTCAAACTCTTCTTACATCCAAAAGATAAAACTAAGCCACCAGGTCCACCGGCGTTACCAATAATCGGAAACCTCCACATATTAGGCAACCTTCCGCACCGAAAACTTCAATCACTCTCCAAAAAATATGGTCCAATTATGTTCTTACAACTTGGTCAAATTCCAACTATTATCATTTCATCTTCAAAAGCTGCAGAATCATTCCTCAAAACTCACGATATTGTTTTTGCAAGCCGCCCAAAGATTCAAGCTTCTTTGCTCATTTCTTATGGTTCAAAAGGGTTTGCTTTTTCTGAGTATGGTCCTTATTGGCGTAGTATGAAAAAACTTTGCACTTTGAAACTTCTTAGTGCTTCAAAAGTTGAAATGTTTGGTCCTATAAGACGGGAAGAGTTAGGTGTTTTAGTTAAGTTGTTAAAGAAAACTTCGATGGTGGGTGAGGTTGTGAATGGCATAATACGAGCTTGCAAGAAAACCAGCAAAGCACTTGATGAAGTGCTAGAGGCGATAATAACTGAGCATGAACAAACTACTTCTACAAACAAAACTCATCATGGTGACTTTGTATATATACTTCTCTCAATTATGAACCAAACCATTGATTCAGAAACTGAACAAAATCATGTTATTGATCGAACGAATATCAAGGCAATTTTACTAGACATGATCGTAGCTGCAATTGATACATCGGCTACCATGATTGAATGGGCTTTATCCGAACTTCTAAGGCATCCAAGAGTGATGAAAATCCTTCAAGATGAGATACAAAATGAAATAGGAAGTAAAAGAATGAACAGTAAAGCGGCTAAGGTACCAAAGAAATATGAAGTTGATGTGTTGCTTCTATTGTTGTCTGCTATATGGCAGAGAATTATATATGTCATGGTTGAATGTATCTGCAGTGTTACAGGTCATTATACGGAGCGTGTTGCGGCTGCTGTTGTGAAGACTATTGTGGAGGTTGTGCAGCTTTGTCATAAGCTAGGTACGGAACTGAATCATAAGTCAGGCAGAGACAAACATGGCCGTAAGATCCTCCGCATTATCGAAAAATTCTTCCCTGCACGATTGGTTAGCGTTGATGTTCTGAAGAAGTATTTGGAAGAGAGGATTTTCCCGAAATTAGGGAAGAAGAAATTCACGGTGTTGTATGTTCATATCGGTGTTCAGAGGAGCGAGAATTTTGCCGGAATTTCATCTCTCCGATCGATCTACGATGCGATTCCGGCTAACGTGAAAGAGAATTTAGAAGCGTTTTATTTTATTCATCCTGGTTTACAGGCTCGTCTTTTTCTCGCTACTTTTGGCCGTTTTCTCTTCAACGCCGGGTTGTACGGGAAGCTAAGCCACTTTTCTTCTTTAACGACGATTGCTTCAAACTTCGACAATGTTCCTCACTATACCTCTGATTCCAATTCTTACGACTCCGACTTCAGAGACGATTTTGACACGAAAGGCCCAGACCAAGAGTGTGGCTATGAGTATCGTTATTTGATAAACAATGAGGTTTGGCGCGCTGTGGTGGCGGATATTTGA 1596 0.3929 MSSTSITILVFLLFTFTYLLFKLFLHPKDKTKPPGPPALPIIGNLHILGNLPHRKLQSLSKKYGPIMFLQLGQIPTIIISSSKAAESFLKTHDIVFASRPKIQASLLISYGSKGFAFSEYGPYWRSMKKLCTLKLLSASKVEMFGPIRREELGVLVKLLKKTSMVGEVVNGIIRACKKTSKALDEVLEAIITEHEQTTSTNKTHHGDFVYILLSIMNQTIDSETEQNHVIDRTNIKAILLDMIVAAIDTSATMIEWALSELLRHPRVMKILQDEIQNEIGSKRMNSKAAKVPKKYEVDVLLLLLSAIWQRIIYVMVECICSVTGHYTERVAAAVVKTIVEVVQLCHKLGTELNHKSGRDKHGRKILRIIEKFFPARLVSVDVLKKYLEERIFPKLGKKKFTVLYVHIGVQRSENFAGISSLRSIYDAIPANVKENLEAFYFIHPGLQARLFLATFGRFLFNAGLYGKLSHFSSLTTIASNFDNVPHYTSDSNSYDSDFRDDFDTKGPDQECGYEYRYLINNEVWRAVVADI 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03678 531 Pfam Divergent CRAL/TRIO domain 362 482 IPR001251 -
Trre10g03678 531 SUPERFAMILY Cytochrome P450 26 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03678 531 Pfam Cytochrome P450 33 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03678 531 Pfam Cytochrome P450 172 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03678 531 Gene3D Cytochrome P450 170 294 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03678 531 Gene3D Cytochrome P450 25 169 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03678 531 PANTHER CYTOCHROME P450 93A3-LIKE 7 170 - -
Trre10g03678 531 Gene3D - 350 484 IPR036865 -
Trre10g03678 531 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03678 531 PRINTS E-class P450 group I signature 525 531 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03678 531 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03678 Trre-Chr10 46204198 46215290 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03678 1 276 Cytochrome P450 AT3G48320 34.337 2.55e-56 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03678 - - rcn:112184619 296.204