Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03676 ATGTCTTCTACATCAATAACAATATTTGTTTTTCTTCTCTTCACTTTCACATACTTTTTAATCAAACTCTTCTTACATCTAAAACATAAAACCATTAATCATAAGAAGCCACCAGGTCCCTCACCACTCCCAATAATCGGAAACCTCCACCTATTAGGTACCCTTCCACATAGAACACTTCAATCACTCTCCAAAAAATATGGTCCAATCATGTCCTTTCAACTAGGTCAAGTCCCAGCTATTGTCATTTCATCTTCAAAAGTTGCAGAGTCATTCCTCAAAACTAACGACACCGTTTTCGCGAACCGACCAAATATTATAGGAGCGGAGATCATGTCTTATGGTTGCAAAGGGATGTCATTTTCTAAGTATGGCCCTTATTGGCGTAGTGTCCGGAAACTTTGTGCTTTGAAACTTCTTAGTCCTTCAAAAGTTGAAATGTTTGGTCCTATTAGGAAGGAGAAGTTGGATGTTTTGGTTAAGTCATTGGAAAAAGCTAGTTTGGTTAGTGAGGTTGTGAATGTTAGTGAAGTTGTAGAGAATCTTATAGAGGATATTGTCTATAAGATGGTATTGAGTCGGAGTAAGTATGATCAATTTAACTTAAAGAAGTTGGTTCAAGAAGTGATGACTTTGGTTGGATCTTTTAACTTGGCTGATTATGTTCCTTTGCTAGGTGCATTTGATCTTCAGGGATTAACACGGGCCTGCAAAAGAACTAGTAAAGCACTTGATGAGGTGTTGGAGACGATAATAACAGAGCATGAACAAACTACTAATTATATTGACAAAACTCGTCATGAAGATTTTGTAGACATACTTCTCACTTTTATGCACCAAAACATTGATGATGGGAGTGAACAAAATCATAACATTGATCGAACTAACATCAAAGCTATTTTACTAGACATGATTGTGGCATCAATTGATACATCTGCTATCACAATTGAATGGGCTTTATCTGAACTTCTAAGACATCCAAGAGTGATGAAAAAACTTCAAGATGAGATACAAAATGAAGTAGGAAATAAGAGAGTGGTTGAAGAGAAGGATTTGAAGAAGTTGAATTACTTAGATATGGTGGTTAATGAAACTTTACGACTTCATCCTGTTTCACCTTTATTACTCCCCCGTGAATGTAGAGAGAGTATAACAATTGATGGTTATTTTATAAAGGAAAAGACACGAGTTATAGTGAATGCATTGCCAATAGGGAGGGATCCTAATATTTGGTCAGAAAATGGCGAAGAATTTTATCCAGAGAGATTTATTAATAAGAAAATGAATTACGAAGGACAAGAGTTTGAAAGTATACCATTTGGATTTGGTCGTAGGCGTTGTCCTGGGATTCAATTGGGTTTGACGACTGTTAGGTTTGTTTTAGCTCAATTGGTGCATTGCTTCAATTGGAAACTTCCATATAATATTAGTCCTTCCAATTTGAACATGGAGGAGAAATTTGGACAATCTATACATAGAGCTCAACCCTTGCATGCAATACCAAGTTATCGTTTGGCAGGTGATGACAAGCTTGAATAG 1539 0.3632 MSSTSITIFVFLLFTFTYFLIKLFLHLKHKTINHKKPPGPSPLPIIGNLHLLGTLPHRTLQSLSKKYGPIMSFQLGQVPAIVISSSKVAESFLKTNDTVFANRPNIIGAEIMSYGCKGMSFSKYGPYWRSVRKLCALKLLSPSKVEMFGPIRKEKLDVLVKSLEKASLVSEVVNVSEVVENLIEDIVYKMVLSRSKYDQFNLKKLVQEVMTLVGSFNLADYVPLLGAFDLQGLTRACKRTSKALDEVLETIITEHEQTTNYIDKTRHEDFVDILLTFMHQNIDDGSEQNHNIDRTNIKAILLDMIVASIDTSAITIEWALSELLRHPRVMKKLQDEIQNEVGNKRVVEEKDLKKLNYLDMVVNETLRLHPVSPLLLPRECRESITIDGYFIKEKTRVIVNALPIGRDPNIWSENGEEFYPERFINKKMNYEGQEFESIPFGFGRRRCPGIQLGLTTVRFVLAQLVHCFNWKLPYNISPSNLNMEEKFGQSIHRAQPLHAIPSYRLAGDDKLE 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03676 512 CDD CYP71-like 66 497 - -
Trre10g03676 512 Gene3D Cytochrome P450 27 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 Coils Coil 330 350 - -
Trre10g03676 512 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 FunFam Cytochrome P450 83B1 24 500 - -
Trre10g03676 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Trre10g03676 512 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 PANTHER CYTOCHROME P450 93A3-LIKE 14 505 - -
Trre10g03676 512 Pfam Cytochrome P450 37 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03676 512 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03676 Trre-Chr10 46196591 46198764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03676 7 506 Cytochrome P450 AT5G07990 39.689 3.94e-125 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03676 - - psat:127113357 719.924