Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03669 ATGGAAAACCCTAGAAACGGTCATTTAATCGATGACTATGATGATCCAGGGAGTGCATTATCCGCTGACTCAACCGAATCAAGATGGGTTTTCGAGGAAGATGAAAATCTTTCTGAGATCGAGGATTACGATGCTTCTGATATGCGACACCAATCTATGTTTGATTCAGAAGAAGAAGATAATGTTGACCAGAAGCTTATTCGTACTGGTCCTCGTGTTGATTCGTTTGATGTTGAAGCTCTTGAGGTTCCTGGTGCTCATACACATCACTATGAGGATATGAGCACGGGAAAGAAAATTGTGTTGGCTTTTCAAACTCTAGGTGTTGTCTTTGGTGATGTTGGAACAAGTCCATTATATACCTTTAGTGTTATGTTTAGAAAGGCTCCTATTAAGGGCAATGAAGACATTCTTGGGGCATTATCACTTGTCTTGTACACTTTAATCTTGATTCCTCTGCTCAAGTATGTTCTTGTCGTTCTTTGGGCCAACGACGATGGTGAAGGTGGCACATTTGCATTATATTCCTTGATTTGTCGTAATGCTAAGGTGAATCTTCTTCCCAATCAGTTGCCGTCAGATGCCCGTATATCAGGCTTTAGGCTAAAGGTGCCGTCCCCTGAGCTTGAGAGGTCTTTAAAAATCAAGGAAAGGCTAGAGACTTCACTCACTCTCAAGAAGATTCTACTATTATTAGTTCTCGCTGGTACTTCTATGGTGATAGCTAATGGGGTTGTTACACCAGCAATGTCAGTACTATCATCTGTTAATGGCTTGAAAGTTGGGGTAGATGCCATTGAGCAAGATGAAGTGGTGATGATTTCTGTTGCTTGCCTTGTCGTTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTTGGGCTTCTCGTAGGACCTGCATTGTTTATATGGTTTTGTTCTCTTGCGGGCATGGGTGTATACAATCTTGTCAAATATGACAGCAGTGTCTGGAGGGCTTTTAATCCTATTCACATCTATTATTTCTTTGCAAGGAATTCAACAAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACAGGCTCTGAAGCCATGTTTGCAGATCTTTGCTACTTTTCTGTTCGATCAGTTCAGCTTACATTTGCATTTCTTGTTTTGCCGTGCCTACTACTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAACACCATGCTGATGCTGGTGAAGCCTTTTTTACTTCTGTTCCAAGTGGTGTATTCTGGCCAACTTTTCTCATCGCTAACATTGCTGCACTAATTGCAAGTCGAACAATGACAACAGCTACATTTTCCTGCATAAAACAGTCAACTGCTCTTGGTTGTTTCCCTCGTCTTAAAATAATCCATACCTCTCGGAAATTTATGGGTCAAATCTATATCCCTGTCATAAACTGGTTCCTGTTGGCTGTTTCTCTGGTGTTTGTCTGCACTATATCCAGCATGGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGTGTGATGATGATGACCACCATTTTAGTGACTCTTGTTATGCTTCTTATATGGCAGTTGCATATCCTCATAGTGGCAAGTTTCCTGGTAGTCTTCTTGAGTTTGGAGTTGGTTTTCTTTTCATCGGTTTTGTGGGGCATAACAGATGGAAGTTGGATTATATTGGTCTTTGCTGCAATAATGTTTTTTATAATGTTCGTATGGAACTATGGAAGCAAGCTTAAGTATGAAGCTGAAGTCAAGCAAAGGCTGTCACCGGATTTAATGCGAGACTTGGGCTGCAATCTTGGGACAATACGAGCTCCTGGAATCGGTCTACTTTATAATGAGTTGGTCAAAGGAATTCCAGGAATTTTGGGGCATTTTCTAACCACACTTCCAGCAATACACTCAATGATTATACTTGTGAGTATCAAGTATGTTCCAGTTGCTATGGTGCCTCAAAGTGAAAGGTTTCTATTTCGGCGAGTCTGCCAGAGAAGCTATCATTTATTTCGTTGTATTGCCAGGTATGGTTACAAAGATGCTCGAAAAGAAAATCACCAGGCTTTTGAGCAGCTTTTAATGGAGAGTTTAGAGAAGTTTATACGTCGTGAGGCACAGGAGAGATCACTTGAAAGTGACGGGGATGAGGATACTGATTTAGAGGATGAGTACTCTAATTCTAGAGTTCTCATAGCTCCCAATGGCAGTGTTTACCAACTTGGTGTTCCTCTTCTGGCTGATTTTAATGAAAACTTCATTCCCAGTTTTGAAGCTAGCACATCAGTTGATGCACCGCCTGCCTCTCCCAAACCCCCTGTGCTCGATGCAGAGCAGCTTCTGGAAAGAGAGTTAGCTTTTATACGCACGGCTAAAGAATCTGGATTGGTTTATCTTCTCGGTCATGGAGATATAAGGGCAAGGAAAGATTCCTGGTTTGCTAAGAAGCTAGTTATAAACTATTTTTATGCCTTTCTTAGAAAGAACTGCAGAAGGGGGGTTACAAATTTAAGCGTACCGCAATCACATCTGATGCAGGTTGGAATGACTTACATGGTTTGA 2547 0.4154 MENPRNGHLIDDYDDPGSALSADSTESRWVFEEDENLSEIEDYDASDMRHQSMFDSEEEDNVDQKLIRTGPRVDSFDVEALEVPGAHTHHYEDMSTGKKIVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPIKGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRNAKVNLLPNQLPSDARISGFRLKVPSPELERSLKIKERLETSLTLKKILLLLVLAGTSMVIANGVVTPAMSVLSSVNGLKVGVDAIEQDEVVMISVACLVVLFSVQKYGTSKVGLLVGPALFIWFCSLAGMGVYNLVKYDSSVWRAFNPIHIYYFFARNSTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFAFLVLPCLLLGYLGQAAYLMEHHADAGEAFFTSVPSGVFWPTFLIANIAALIASRTMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVFVCTISSMDEIGNAYGIAELGVMMMTTILVTLVMLLIWQLHILIVASFLVVFLSLELVFFSSVLWGITDGSWIILVFAAIMFFIMFVWNYGSKLKYEAEVKQRLSPDLMRDLGCNLGTIRAPGIGLLYNELVKGIPGILGHFLTTLPAIHSMIILVSIKYVPVAMVPQSERFLFRRVCQRSYHLFRCIARYGYKDARKENHQAFEQLLMESLEKFIRREAQERSLESDGDEDTDLEDEYSNSRVLIAPNGSVYQLGVPLLADFNENFIPSFEASTSVDAPPASPKPPVLDAEQLLERELAFIRTAKESGLVYLLGHGDIRARKDSWFAKKLVINYFYAFLRKNCRRGVTNLSVPQSHLMQVGMTYMV 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03669 848 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 95 846 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre10g03669 848 MobiDBLite consensus disorder prediction 1 33 - -
Trre10g03669 848 NCBIfam potassium uptake protein 102 848 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre10g03669 848 Pfam K+ potassium transporter 103 676 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03669 Trre-Chr10 46151283 46159093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03669 17 848 Inorganic Solute Cotransporters AT5G09400 76.225 0.0 1265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03669 - - gmx:100803841 1425.99