Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03595 ATGGCTATTGGACTTTTCTACTATGGTCTTCGAGATACATCAGCTACATACTCTGTCAACTTTCTCAACCTGATTCCTATCTGCACATTCTTGATTTCTATCATTTGCAGAATAGAGAATATGAAGATTAGAACATGGAGTGGTAAAGCTATGTGTATTGGAGCAATGATGTGTGTTGGTGGAGCATTAGTTACAACTCTTTACAAAGGGAAGAAATTTTATATTGGTCATCATCATATTCACCATTCTATTGAGATAAGTGTTGTTGCATCACACAAAACTCACATGCTTCGTGGAACTTTGTGTTTGATTGGATCCTGCTGCTCTTTCACAGCTTGGTTTATTCTTCAAGTAAAGTTTGTGAAAGTATTTCCATTAAGGTATTGGGGAACAATGTTATCATGCATTATGGCATCAATTCAGTCGGCAGTAATAGGTGCATACATAGATCCTAGAAAAGAAGTTTGGAGATTAGAATGGAATCTACAACTCATTACTATATTTTACTCGGGTGCATTGGCTACTGCTGCAACATTTTGTTTAGTATCATGGGTAATTACAATCAAGGGACCTACTTACCCTCCAATGTTCAATCCATTGGCTTTAGTTTTCATTGCCATATCAGAGGCTATCATACTTGGTGAACCACTAAAAGTTGGAACGTTGGTGGGCATGGTTTTGGTCATAATGGGATTGTACTACTTTTTATGGGGTAAAAGGAATATGATTCCACATTTGCCTCAACCAAATATAGCAGCTGCTACATTATCAACAAGCATGGCTGATGACCCTCCCATGGCTCAATCAACGGCCATAATAGTTCCAAGTTCTTCACCTGATGAGAGTGTACTTGTTGAAATTGATAAAATTGGCAAAAATTAA 882 0.3741 MAIGLFYYGLRDTSATYSVNFLNLIPICTFLISIICRIENMKIRTWSGKAMCIGAMMCVGGALVTTLYKGKKFYIGHHHIHHSIEISVVASHKTHMLRGTLCLIGSCCSFTAWFILQVKFVKVFPLRYWGTMLSCIMASIQSAVIGAYIDPRKEVWRLEWNLQLITIFYSGALATAATFCLVSWVITIKGPTYPPMFNPLALVFIAISEAIILGEPLKVGTLVGMVLVIMGLYYFLWGKRNMIPHLPQPNIAAATLSTSMADDPPMAQSTAIIVPSSSPDESVLVEIDKIGKN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03595 293 Pfam EamA-like transporter family 98 236 IPR000620 GO:0016020
Trre10g03595 293 SUPERFAMILY Multidrug resistance efflux transporter EmrE 160 240 - -
Trre10g03595 293 PANTHER WAT1-RELATED PROTEIN 4 243 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03595 Trre-Chr10 45587711 45590422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03595 5 239 Nodulin-like Gene Family AT1G09380 38.075 3.72e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03595 - - psat:127112970 406.371