Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03594 ATGACCATGGCTATTGGACTTTTCTACTATGGTCTTCGAGATACATCAGCTACATACTCTGTCAACTTTCTCAACCTGATTCCTATCTGCACATTCTTGATTTCTATCATTTGCAGAATAGAGAATATGAAGATTAGAACATGGAGTGGTAAAGCTATGTGTATTGGAGCAATGATGTGTGTTGGTGGAGCATTAGTTACAACTCTTTACAAAGGGAAGAAATTTTATATTGGTCATCATCATATTCACCATTCTATTGAGATAAGTGTTGTTGCATCACACAAAACTCACATGCTTCGTGGAACTTTGTGTTTGATTGGATCCTGCTGCTCTTTCACAGCTTGGTTTATTCTTCAAGTAAAGTTTGTGAAAGTATTTCCATTAAGGTATTGGGGAACAATGTTATCATGCATTATGGCATCAATTCAGTCGGCAGTAATAGGTGCATACATAGATCCTAGAAAAGAAGTTTGGAGATTAGAATGGAATCTACAACTCATTACTATATTTTACTCGGGTGCATTGGCTACTGCTGCAACATTTTGTTTAGTATCATGGGTAATTACAATCAAGGGACCTACTTACCCTCCAATGTTCAATCCATTGGCTTTAGTTTTCATTGCCATATCAGAGGCTATCATACTTGGTGAACCACTAAAAGTTGGAACGTTGGTGGGCATGGTTTTGGTCATAATGGGATTGTACTACTTTTTATGGGGTAAAAGGAATATGATTCCACATTTGCCTCAACCAAATATAGCAGCTGCTACATTATCAACAAGCATGGCTGATGACCCTCCCATGGCTCAATCAACGGCCATAATAGTTCCAAGTTCTTCACCTGATGAGAGTGTACTTGTTGAAATTGATAAAATTGGCAAAAATTAA 888 0.375 MTMAIGLFYYGLRDTSATYSVNFLNLIPICTFLISIICRIENMKIRTWSGKAMCIGAMMCVGGALVTTLYKGKKFYIGHHHIHHSIEISVVASHKTHMLRGTLCLIGSCCSFTAWFILQVKFVKVFPLRYWGTMLSCIMASIQSAVIGAYIDPRKEVWRLEWNLQLITIFYSGALATAATFCLVSWVITIKGPTYPPMFNPLALVFIAISEAIILGEPLKVGTLVGMVLVIMGLYYFLWGKRNMIPHLPQPNIAAATLSTSMADDPPMAQSTAIIVPSSSPDESVLVEIDKIGKN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03594 295 SUPERFAMILY Multidrug resistance efflux transporter EmrE 162 242 - -
Trre10g03594 295 PANTHER WAT1-RELATED PROTEIN 2 245 IPR030184 GO:0016020|GO:0022857
Trre10g03594 295 Pfam EamA-like transporter family 100 238 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03594 Trre-Chr10 45587705 45590422 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03594 7 241 Nodulin-like Gene Family AT1G09380 38.075 3.63e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03594 - - psat:127112970 410.223