Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03591 ATGACAATGGCTCTAGGATTCTTCTATTATGGTCTTCGAGACACATCAGCTACATACTCTGTCAACTTTCTAAACATGGTTCCTATTTTCACATTCATGACCTCAATCATATGCAGAATGGAGTCTCTAAGAATAGGAACTTGGGGTGGCAAAGCCAAGTGCATTGGAGCACTTCTCTGTGTTGGTGGAGCTTTAGTAACTGGATTGTATAAAGGAAAGGAATTTTATATCTCTCATCATCATGCTCACCATGCTGCTCAAACAAGTGTTGTTGCAGCACATAAAATCCACATGCTTCGTGGTACTTTCTTTTTGATTGCTGCATGCTTCTCTTACACGGCTTGGTTTATTCTTCAAGCAAAGTTGATGAAACTATTTCCATTGAGGTATTGGGGAACAATGCTATCATGCGTTATGGCAGCACTTCAGGCGGCAATAATAGGCGTATGCATAGATTCCAGCAAAGAAGTTTGGAAATTAGAGTGGAATTTGCAACTTGTTACTATAATCTACTCGGGAGCATTGGCTACTGCGGCTACATTCTGTTTGTTGTCAATGGCAATTACACTCAAGGGACCTACTTACCCTCCAATGTTCAATCCACTGGCTCTTATTTTTGTTGCCATATCAGAGGCACTCATACTCGGTGAACCACTAAAAGTTGGAACGTTGGTGGGCATGGTTTTGATCATATTAGGGTTGTACTTCTTTTTATGGGGTAAAAAGAATGAGACACCACTTTTGCCTCAAACAAATGTAGCAGCTGGAGAATTATCAACAAGCATGGCTATTGATGATTCTTTTCAAGCTCAATCAACTGATGTGGTAACACCAAGTTCTTTACCTAATAAAAGTGTACATCTTGAAATTGAAAAAAGCTGA 882 0.398 MTMALGFFYYGLRDTSATYSVNFLNMVPIFTFMTSIICRMESLRIGTWGGKAKCIGALLCVGGALVTGLYKGKEFYISHHHAHHAAQTSVVAAHKIHMLRGTFFLIAACFSYTAWFILQAKLMKLFPLRYWGTMLSCVMAALQAAIIGVCIDSSKEVWKLEWNLQLVTIIYSGALATAATFCLLSMAITLKGPTYPPMFNPLALIFVAISEALILGEPLKVGTLVGMVLIILGLYFFLWGKKNETPLLPQTNVAAGELSTSMAIDDSFQAQSTDVVTPSSLPNKSVHLEIEKS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03591 293 Pfam EamA-like transporter family 100 238 IPR000620 GO:0016020
Trre10g03591 293 PANTHER WAT1-RELATED PROTEIN 2 250 IPR030184 GO:0016020|GO:0022857
Trre10g03591 293 SUPERFAMILY Multidrug resistance efflux transporter EmrE 167 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03591 Trre-Chr10 45538501 45542580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03591 8 242 Nodulin-like Gene Family AT1G09380 35.565 2.80e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03591 - - psat:127112970 400.979