Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03583 ATGGCTTCTATGAGCCATATTCTCCTCTTATTTTGCTTCTTCAATCTAAGAACACATCTAGTATCATCATCAGCTTATTCAGCTAGTGATGTTCCAATCAATGTAACAAAACACTTCTCTTTCCTAGATTTCAGCTTAACTAATAACTCAAGATTAGTCCATGATTTGAAGCTTCTTGGAAATGCAAAGTTTTCAAATGAAAAGGGTTCACTTCAAATCCCAAATGAATCACAAGAAACAGATATAAGACATCAAGCAGGTAGAGGTTTATATTCCTTTCCAATTCGTTTGTTAGATCCAATTACCAAAACACCAGCTTCTTTTCAAACCACCTTTTCTTTTCAGCTTAATAATTTAAGTACTAATTCTGATTTAAGTGATTATGGTGGTGGTAGTGGACTTACCTTTATCATTGTACCTGATGAATTCACTGTTGGAAGGCCAGGACCTTGGCTTGGTATGCTTAATGATGCTTGTGAGAATGATTATAAAGCGGTTGCAATTGAGTTTGATACACGAAAGAATCCGGAATTTGGTGATCCAAATGATAATCATGTTGGTATTAATTTAGGTAGCATAGTATCTACTAAAATTATCAATGTTTCTGATGTTGGAGTTTCACTTAAAGATGGTTTTGTTCACCATGCTTGGATCGATTATGACGGTTCACGAAGGAGAATTGATATTCGTTTAGGACTTGCGAACGAAGAAGTTTATCCTATCAAGCCTATCTTCTCGGAATTTATGGATCTCTCGCCTTATCTGAATGAGTATATGTTTGTAGGATTCTCAGCTTCAACCGGTAACCACACACAAATTCACAACATACTGTCTTGGAACTTTACTTCAAATAGCCAAGCTTTTCTTCGCTATCCTTCATCTGAAACATGTCAAGGTAAGATCATGCTTGAGAATACTACAGAAACAACAGCAGCTACCGATAAGAAATCTAATAGGAACGAAACTCCGCGAAGCTTTTTGATTTTTGTGGCTGCTGTAGTGTTGGCTTTGGTTGTTTTAGTTGGTTTTTACTTTATCAGCAGACACAGAAGAAGTGTTTCTAAATCAAAGACTTCTATAGAGGAAGATCTTCATAGGCCAAGGCCTCCTAACAAACCACGCCGCTTTGCTTTTTCAGCAATTTCCTCTTCGACTAGATCATTCAGTGAGATAGAAGTACTTGGAAGTGATACTAGAGGAGTATACTACAGAGGAAAACTTAGTAATGGAAGCCAAGTAGCTGTGAAAAGATTCTCAACTGAATTTCTCAACACACACGGATCCGATAAGAAGCGTTTGTTGAAAGAAATCAAAGTCATTAGTCATGTTCGTCACCCGAATTTGCTTCCTATAAGGGGATGGTGTCAAGACAACAATGAAATCATTGCAGTCTATGATTTTGTCCCTAATGGAAGCCTCGATAAATGGCTATTCGGAGCCGGTGTTCTTCCTTGGACACGTCGGTTCAAAGTGATCAAAGATGTAGCCGACGGCTTGAGTTTCTTGCACAGTAAACAACTAGCTCACAAGAACATGAAATGCAGCAGTGTTTTTCTAGATGTCAGCTTCAGAGCTGTTTTGGGAGATTTTGGATTTGTGCTATTGGGAGCAGAATCAAAACAGTTTGAATCAGTCGTGTGTAATGGTGCTGATGTGTTTGAGTTTGGTGTGATTGTGTTGGAAGTGATAGGTGGAAGGCCAAGAGTGGAAGCAGAAACAGATGAAGAAAAACAAGAAGAGAGGAACTTATTGGATTATGCATGGAACTTGCATGAGACTGGTGAGAAAGTGAAGCTGGTTGATAGAAGAATGGGATCATTGATCAATTTGGAGCAAGCGATTCGAGTTATGGAAATAGGGTTGCTATGTACTTTGAATGAGAACAAAGGAAGACCTTCCATGGAGCAAGTTGTAGAGCTTCTGCATAACATGGAGAAGCCTATTCCTGAGTTGCCAAGAACAAGACCAGTTGCTTTGTTTCCTTATAACAGTGCCAACACTGGACTTTGCAATAATTACTCTTGCACTTTGAAGCTGTGA 2040 0.3863 MASMSHILLLFCFFNLRTHLVSSSAYSASDVPINVTKHFSFLDFSLTNNSRLVHDLKLLGNAKFSNEKGSLQIPNESQETDIRHQAGRGLYSFPIRLLDPITKTPASFQTTFSFQLNNLSTNSDLSDYGGGSGLTFIIVPDEFTVGRPGPWLGMLNDACENDYKAVAIEFDTRKNPEFGDPNDNHVGINLGSIVSTKIINVSDVGVSLKDGFVHHAWIDYDGSRRRIDIRLGLANEEVYPIKPIFSEFMDLSPYLNEYMFVGFSASTGNHTQIHNILSWNFTSNSQAFLRYPSSETCQGKIMLENTTETTAATDKKSNRNETPRSFLIFVAAVVLALVVLVGFYFISRHRRSVSKSKTSIEEDLHRPRPPNKPRRFAFSAISSSTRSFSEIEVLGSDTRGVYYRGKLSNGSQVAVKRFSTEFLNTHGSDKKRLLKEIKVISHVRHPNLLPIRGWCQDNNEIIAVYDFVPNGSLDKWLFGAGVLPWTRRFKVIKDVADGLSFLHSKQLAHKNMKCSSVFLDVSFRAVLGDFGFVLLGAESKQFESVVCNGADVFEFGVIVLEVIGGRPRVEAETDEEKQEERNLLDYAWNLHETGEKVKLVDRRMGSLINLEQAIRVMEIGLLCTLNENKGRPSMEQVVELLHNMEKPIPELPRTRPVALFPYNSANTGLCNNYSCTLKL 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03583 679 Pfam Legume lectin domain 38 287 IPR001220 GO:0030246
Trre10g03583 679 CDD lectin_legume_LecRK_Arcelin_ConA 38 284 IPR001220 GO:0030246
Trre10g03583 679 ProSiteProfiles Protein kinase domain profile. 388 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g03583 679 Gene3D - 35 288 - -
Trre10g03583 679 FunFam Lectin-domain containing receptor kinase A4.2 468 649 - -
Trre10g03583 679 PANTHER - 68 643 - -
Trre10g03583 679 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 36 291 - -
Trre10g03583 679 Pfam Protein tyrosine and serine/threonine kinase 391 535 IPR001245 GO:0004672|GO:0006468
Trre10g03583 679 SUPERFAMILY Protein kinase-like (PK-like) 365 641 IPR011009 -
Trre10g03583 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 285 IPR013320 -
Trre10g03583 679 Gene3D Phosphorylase Kinase; domain 1 347 467 - -
Trre10g03583 679 Gene3D Transferase(Phosphotransferase) domain 1 468 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03583 Trre-Chr10 45427367 45429406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03583 9 660 Receptor kinase-like Gene Family AT5G55830 32.133 8.22e-98 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre10g03583 Pkinase 6.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03583 - - gmx:100781464 1077.39