Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03573 ATGGAGAGTCTAAGGATTGGAACATGGAGTGGCAAAGCCAAGTGCATTGGAGCACTTCTTTGTGTTGGTGGAGCTTTAGTAACCAGATTGTATAAAGGAAAGGAGTTTTATATCTCTCATCATCATGCCCACCATGCTGCTCAAACAAGTGTTGTTGCAGCTCATAAAATCCACATGCTTCGTGGCACTTTCTTTTTGATTGCTGCATGCTTCTCTTACACAGCTTGGTTTATTCTTCAAGCAAAGTTGATGATACTATTTCCCTTGAGGTATTGGGGAACAATGCTATCATGCGTTATGGCAGCACTTCAGGCGGCAATTATAGGCGTATGCATAGATTCCAGCAAAGAAGCTTGGAAATTAGAGTGGAATTTACAGCTTATTACAATAATCTACTCGGGTGCATTGGCTACTGCGGCTACATTCTGTTTACTAGGCACTCTCATTCTTGGTGAACCATTAAAAATTGGAACGTTGGTGGGCATGGTTCTGATCATATTAGGGTTGTACTTCTTTTTATGGGCTAAAAAGAATGAGACATCACGTTCACCTCAAACAAATGTAGCAGCTGGAGAATTATCAACAAGCATGGCTATTGATGAATCTTTTCAAGCTCAATCAACTGGTGTGGTAACACCAATTAGTTCTTTACCTAATAAAAGTGTACATCTTGAAATTGAAAAAAACTGA 690 0.3971 MESLRIGTWSGKAKCIGALLCVGGALVTRLYKGKEFYISHHHAHHAAQTSVVAAHKIHMLRGTFFLIAACFSYTAWFILQAKLMILFPLRYWGTMLSCVMAALQAAIIGVCIDSSKEAWKLEWNLQLITIIYSGALATAATFCLLGTLILGEPLKIGTLVGMVLIILGLYFFLWAKKNETSRSPQTNVAAGELSTSMAIDESFQAQSTGVVTPISSLPNKSVHLEIEKN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03573 229 PANTHER WAT1-RELATED PROTEIN 143 183 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03573 Trre-Chr10 45375579 45377328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03573 1 196 Nodulin-like Gene Family AT1G68170 29.741 3.42e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03573 - - psat:127112970 273.478