Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03572 ATGGCTTTTCTGATTCTGATTTATCAAAACTTGTTAAGAAACACCCTTTTGCCTAAACTCAAATTTTTGCAATCCATTGGGGTTTCAATCACAGATTTCCCCAAAATCATAAATGGGAATATTTGCTATTTAACAAGTTTGGAGAAAAACCTTATACCTCGGTATCAGATTATTCGGAGTCTTGTTCGCGATGATAAAGAGGTAGTTTCAGCTTTGAAGCGTTTGTCTTGGAACTTTTACAGTGATTCCATGGTAACTGATTCTGTTCCAAACATTGAGGTTTTGAGGAAGCTTGGTGTTCCTCAAAGTTCGATTTCACTTTTGGTATCCAATTTTCCCAATGTTGCATTTACCAAGCATTTTAGGTTTGTTGAGGCTGTTAATTTTGTCAAGGAAATGGGGTTCGATCCATTGAAGTCGAATTTTGTTTTGGCGGTTCAAGTAATTGCAAAGATGGACAAAGAGATTTGGGAGTCAAAATTGAAGATTTTTGAGAGGTGGGGTTGGTCGAGAGATATCTGTCTTTTGGCATTCCAAAAGCATCCTCAATTTATGTCGACCTCAGAAAAAAAGATTATGAAAGTAATGAGTTTCTTGGTGAAGGATGTTGCTCTAACACCAGAAGACATTGCTGGAATCCCTTGGCTTCTGAACCGCAACTTGGAGAAAACACTTGTCCCTAGATGTGCAGTTGTTAAGATTTTGAAGTCAAGGGGTTTCATAAAGAGTGGTTTGCGCATAAGTAGCTTTATTGTCGTAACTGAGAAAACATTTTTGGAGAAATATGTTACCCCATTTGAGAAAGATTTGCCAATCGTGTTGGATGCATATAAAGGTCAGAAGTCAGATTGA 852 0.3756 MAFLILIYQNLLRNTLLPKLKFLQSIGVSITDFPKIINGNICYLTSLEKNLIPRYQIIRSLVRDDKEVVSALKRLSWNFYSDSMVTDSVPNIEVLRKLGVPQSSISLLVSNFPNVAFTKHFRFVEAVNFVKEMGFDPLKSNFVLAVQVIAKMDKEIWESKLKIFERWGWSRDICLLAFQKHPQFMSTSEKKIMKVMSFLVKDVALTPEDIAGIPWLLNRNLEKTLVPRCAVVKILKSRGFIKSGLRISSFIVVTEKTFLEKYVTPFEKDLPIVLDAYKGQKSD 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03572 283 Pfam mTERF 151 259 IPR003690 GO:0003690|GO:0006355
Trre10g03572 283 Pfam mTERF 13 194 IPR003690 GO:0003690|GO:0006355
Trre10g03572 283 Gene3D Transcription termination factor 3, mitochondrial 42 269 IPR038538 -
Trre10g03572 283 PANTHER CGI-12 PROTEIN-RELATED 8 265 IPR003690 GO:0003690|GO:0006355
Trre10g03572 283 SMART mt_12 106 136 IPR003690 GO:0003690|GO:0006355
Trre10g03572 283 SMART mt_12 1 29 IPR003690 GO:0003690|GO:0006355
Trre10g03572 283 SMART mt_12 207 241 IPR003690 GO:0003690|GO:0006355
Trre10g03572 283 SMART mt_12 175 206 IPR003690 GO:0003690|GO:0006355
Trre10g03572 283 FunFam Mitochondrial transcription termination factor-like 47 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03572 Trre-Chr10 45373116 45373967 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre10g03572 mTERF 2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03572 K15032 - gmx:106799612 320.857