Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03534 ATGGTCTATGAATTTATGCCTCGTGGCAGCTTGGAGAATCACTTGTTCATCAGAGGATCATATTTTCAACCTCTTTCTTGGAACCTCCGTTTGAAGGTCGCTCTCGGTGCTGCAAAAGGCCTTGCATTTCTTCACAGTGCTGAAACAAAAGCGGCATACCGTGAATTCAAGACTTCAAATGTCTTGCTAGATTCAGTAATCACAGTGCTAAGAGTGATGTCTATAGTTTTGGAGTTTGTCCTATTGGAAATATTATCAGGGAGGAGAGTTGTTGACAAGAATAGACCACAAAGACAACACAATTTGGTGGAATGGGCTAAACCTTATCTATCCAACAAGCGCAAGATTTTGCGCGTGTTGGATAATCGCCTTGAAGGCCAATACGAATTGGAAGATGTTTATAAGGTTGCTATACTCTCCCTACGGTGCCTTTCAATAGAAGCCAAGTTGAGACCAAACATGGATGAGGTAGTTACAAATTTGGAGCAGTTGCAGGCTCCTAATGTAAATGGATGCAATCAGAATCGTTTACGTAGAAGAAGTGCTGATGATGTTCCCCGTGTTAGAACAGCGACGGCTTATCCCCAACGCTCTACTTCTATGCTTTGTACATGA 615 0.4244 MVYEFMPRGSLENHLFIRGSYFQPLSWNLRLKVALGAAKGLAFLHSAETKAAYREFKTSNVLLDSVITVLRVMSIVLEFVLLEILSGRRVVDKNRPQRQHNLVEWAKPYLSNKRKILRVLDNRLEGQYELEDVYKVAILSLRCLSIEAKLRPNMDEVVTNLEQLQAPNVNGCNQNRLRRRSADDVPRVRTATAYPQRSTSMLCT 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03534 204 Gene3D Transferase(Phosphotransferase) domain 1 1 71 - -
Trre10g03534 204 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g03534 204 SUPERFAMILY Protein kinase-like (PK-like) 1 167 IPR011009 -
Trre10g03534 204 Gene3D Transferase(Phosphotransferase) domain 1 77 185 - -
Trre10g03534 204 PANTHER OS01G0588500 PROTEIN-RELATED 70 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03534 Trre-Chr10 45112747 45113889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03534 1 182 Receptor kinase-like Gene Family AT4G02010 33.478 7.99e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre10g03534 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03534 - - lja:Lj3g3v3200890.1 256.914