Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03513 ATGGAAGAAGTCGTGAATTCTATCATGCGTGCTTTTGAATTGGCCAAAGAACATGAACTTGAACTACCAAACATTTCCAACAACCTTGAAATGCTATTTTCATCCATTGATAAGGTTGAAAAAGCATTTAGTTCTGCAAAAGAGAAATTAATGATGATTATGTCATCACAAAATGACATGACAAAAGTTTCTAATTCTTTTGCTGAAATTCTGTCTCATGATGTTTTCATGCAAAACAATCATGATCATGCTCAAATGGGTGGAAGTGGAGGAACTTCAATGCATGCACATTCAATGGATCATTTGCTTCTAATGCAACAATCTTTTGAGATGCTAAGGTCTAGGGGAACTTTGATGATCGGTGAAATGGGTGGTAGGGATGTGGAAGGTTTAGAGAAATCAAAAGGGTCAGAAGGAGGAGAAATGCAAGGAATAGAAGAACCACCATCACGACCAAAAAAGAGTAGGAAGAATGATTTGGAGAAGAGAACTCAGATGTTTCCAGCACCTCAGATTGGTAACACTGAAATGCCACCAGAAGATGGCTTCACTTGGAGAAAATATGGACAAAAAGAGATACTTGGCCGCAAGTATCCAAGGAGTTACTATAGGTGCACACACCAAAAATTATATTTGTGCCCTGCCAAGAAACAAGTACAAAGACTAGATAACAATCCTAACATAGTTGAAGTGACATATAGAGGTGAACACATTTGTCACAAATCCTTAACAGCACCATCATCATATCCACCACCACCAAACCTACTTGTTAACATTAATACTACTCAAGCTACCATTCCTCCTGAGGCGTGGCCGCCAGCGGTGAACCTCGGCCTCAGGGGTGGAAACGGTAGTGGTGGACCGTCTACTTCAAGATTCGGAGGCATTGATTATCCAGTAACCGATATGGCGGATGCAATGTTCAACTCCGGTAGTAGCAGTGGCAATAGCATGGAATCACTCTTTTATCCAAGTGAAGATAAATGGGAACCTGATGAAAAGATAAATTGA 1011 0.4026 MEEVVNSIMRAFELAKEHELELPNISNNLEMLFSSIDKVEKAFSSAKEKLMMIMSSQNDMTKVSNSFAEILSHDVFMQNNHDHAQMGGSGGTSMHAHSMDHLLLMQQSFEMLRSRGTLMIGEMGGRDVEGLEKSKGSEGGEMQGIEEPPSRPKKSRKNDLEKRTQMFPAPQIGNTEMPPEDGFTWRKYGQKEILGRKYPRSYYRCTHQKLYLCPAKKQVQRLDNNPNIVEVTYRGEHICHKSLTAPSSYPPPPNLLVNINTTQATIPPEAWPPAVNLGLRGGNGSGGPSTSRFGGIDYPVTDMADAMFNSGSSSGNSMESLFYPSEDKWEPDEKIN 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03513 336 MobiDBLite consensus disorder prediction 126 140 - -
Trre10g03513 336 ProSiteProfiles WRKY domain profile. 180 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre10g03513 336 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 70 244 IPR044810 GO:0003700
Trre10g03513 336 Pfam WRKY DNA -binding domain 180 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre10g03513 336 SUPERFAMILY WRKY DNA-binding domain 176 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre10g03513 336 MobiDBLite consensus disorder prediction 309 336 - -
Trre10g03513 336 MobiDBLite consensus disorder prediction 125 160 - -
Trre10g03513 336 Gene3D WRKY domain 169 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre10g03513 336 SMART WRKY_cls 179 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03513 Trre-Chr10 44965205 44968882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03513 1 322 WRKY Transcription Factor Family AT2G40740 35.435 1.71e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre10g03513 WRKY 7.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03513 - - mtr:11424132 494.197