Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03481 ATGGGCGAAGAATTATCAGGTTTGACAGTCAAAGAATTAAAGAGTTTGGAGAACCAATTGGAAATCAGCCTTCGTGGTGTTCGTGTGAAAAAGGAGCAACTTTTTATGGATGAAATACAAGAACTAAATCGAAAGGGAGACATCATACACCAAGAAAATGTGGAACTATATAGGAAGGTCTATGGAACAAAAGATAAGAATGGAACAAACAGAAATTCTGTTCTCACAGATGGTCTAGGCATAGAAGAAGGAGACAATTCCCACGTGCCTGTGAATCTCCAGCTCAGCCAGCCACAGCAACAACGCCTCAAGGCACCCTCAGCAACTACAAAACTGGGGTATGATTTTGATCATTTAGCTAGCAGACCATTAATCATATGA 381 0.4068 MGEELSGLTVKELKSLENQLEISLRGVRVKKEQLFMDEIQELNRKGDIIHQENVELYRKVYGTKDKNGTNRNSVLTDGLGIEEGDNSHVPVNLQLSQPQQQRLKAPSATTKLGYDFDHLASRPLII 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03481 126 ProSiteProfiles K-box domain profile. 1 67 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre10g03481 126 Pfam K-box region 1 60 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre10g03481 126 MobiDBLite consensus disorder prediction 66 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03481 Trre-Chr10 44557166 44557861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03481 1 120 MADS-box Gene Family AT3G57230 46.269 1.06e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03481 K09264 - gmx:100812413 168.318