Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03447 ATGGAGAAAAAACTCTCTTCTAACAACAACACCTTCAAAAAGACTTTGCAAATAACACAAGAGAGCAAAAATCAAAATAAGAATAAGTCTTCTTTCACCGAGCAAGACTCTCTTGTTCTATTACAAAAGTACGACGCGAGCACATTGTTGAAATTGTTGCAAGAAGTGGCGAGTCATGATCGTTGGAAGATTAATTGGAACGAGTTGGTGAAGAATACTTCGACCGGTATTTTGAGTGCGAAAGAGTATCAAATGTTGTGGCGTCATTTGGCCTATGGTCATTCCTTGATTGATGCTGATTTTGAAGATGATGATCTACCTTTGGATGATGATAGTGACTTGGAATGTGAAAGGGAAACGTTACCATCCATACCCAAACAAACTGCTTTGCAAGCTGCAGCATGTGTCCAGGTAATAATATCTTCTGTTTCAATGAGTCAATGTACCCCAACTAGCTCAACAATTGAAGCTCCTTTGACTATAAATGTTCCATCACCATCACATGCTTCATGTAGTACAAGTTCACAACCTTGTAATAATTCGATACAAGAGCCAAACATTGTTTTTCCGGTTATTGTTGAGAGACAAACAAGGCTAAATAATATTAATAATGTATCTTCAACAACAAAATATATACAAAACAATGGATTAGTTGGTCACATTACATCAAATATTCAAAGGAAAAGAAAAGGATGGACAAAGGAAGAGGATATGCAACTACAAGCTGCTGTTAAGAAATGGGGTGAAGGGAATTGGACAGATATTGCTGGAAGAGATGACTTTACTATTGATAAAACTGCTGCACAGTTGTCTAAGAGGTGGAGAATTTTGAGAAATAAAGCTGGTGGAAATAATTGA 858 0.3671 MEKKLSSNNNTFKKTLQITQESKNQNKNKSSFTEQDSLVLLQKYDASTLLKLLQEVASHDRWKINWNELVKNTSTGILSAKEYQMLWRHLAYGHSLIDADFEDDDLPLDDDSDLECERETLPSIPKQTALQAAACVQVIISSVSMSQCTPTSSTIEAPLTINVPSPSHASCSTSSQPCNNSIQEPNIVFPVIVERQTRLNNINNVSSTTKYIQNNGLVGHITSNIQRKRKGWTKEEDMQLQAAVKKWGEGNWTDIAGRDDFTIDKTAAQLSKRWRILRNKAGGNN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03447 285 CDD SANT_TRF 232 279 - -
Trre10g03447 285 Gene3D - 222 282 - -
Trre10g03447 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 224 282 IPR017930 -
Trre10g03447 285 ProSiteProfiles Myb-like domain profile. 224 278 IPR001005 -
Trre10g03447 285 SUPERFAMILY Homeodomain-like 227 278 IPR009057 -
Trre10g03447 285 SMART sant 228 280 IPR001005 -
Trre10g03447 285 Pfam Myb-like DNA-binding domain 229 275 IPR001005 -
Trre10g03447 285 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 23 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03447 Trre-Chr10 44215367 44224212 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre10g03447 Myb_DNA-binding 3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03447 - - tpra:123920135 483.796