Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03440 ATGGCTGATTTTCAGACCTCTACCCACCGATCCAAGTGGATTTTCTCTCCTCAAAAACTGATCGAGAAATATACAGATGCTAATCAGAGAGCCAAGCAAACCCTAGAGCAGTGTGGAGCAACTCTAATGGAAGTAGATGATGATGGGTCTTTGTCATATCCGGAATCCCAGATGACTGCAAACAATAGTGCTGAAAAACATTCTCGGATAAAACCTCTTAGTATTGAAGAGGAGCAATGTATAAAGGCAACAGCCCTCGTATTTTTTAAAAGGTTCTATCTGCAATGGTCAGTGATGGAACATCAACCAAAAAATATAATGTTGACATGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTATCGGCTGAGGAGCTTGGTAAGGTGATTTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAAGTCTGGAATTTGATCTTATTGTTTATGCTCCATATCGCTCAGTTGAAGGTTTTACAGATTATATGGAGGAATTTTGCAATGCCGGTGAGGACGAGCTTCAAATGCTCAAGGCTTTGCAAAATACAGCAAGACTCGAAGTTGATAAAATGATGCTTACAGATGCACCACTCTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCACTACGTACCTCAAATGCTCTCCATAAAGTTCTTGACTTTGATAGTTTTCTGAGCAGAATTTTTTCCCGTCAGAATTCTACGCACACAATGGCCGACCTTCTTGAATCATTGGATGCAATTGAATCTTGGGTTAGAAAATATAGAAGTCCTTCAGAGAAGGAATTGAAGCATATCAACCGGAAACTGAAGTCTTGTTGGGGTCATAGTTCTCATGACGAGGGAAAGAAGAGGGAGAAGAAATCAAAGCACAAGTCCAGAAAGAGCTCAAACGAAGCACAAAATGCTTAG 924 0.4026 MADFQTSTHRSKWIFSPQKLIEKYTDANQRAKQTLEQCGATLMEVDDDGSLSYPESQMTANNSAEKHSRIKPLSIEEEQCIKATALVFFKRFYLQWSVMEHQPKNIMLTCIYAACKIEENHVSAEELGKVISQDHQMILNNEMISLEFDLIVYAPYRSVEGFTDYMEEFCNAGEDELQMLKALQNTARLEVDKMMLTDAPLLFPPGQLALAALRTSNALHKVLDFDSFLSRIFSRQNSTHTMADLLESLDAIESWVRKYRSPSEKELKHINRKLKSCWGHSSHDEGKKREKKSKHKSRKSSNEAQNA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03440 307 Gene3D - 3 152 - -
Trre10g03440 307 Pfam Cyclin, N-terminal domain 79 144 IPR006671 -
Trre10g03440 307 SUPERFAMILY Cyclin-like 6 151 IPR036915 -
Trre10g03440 307 PANTHER CYCLIN 9 301 IPR043198 GO:0006357|GO:0016538
Trre10g03440 307 FunFam Cyclin h 153 258 - -
Trre10g03440 307 Gene3D - 153 258 - -
Trre10g03440 307 Pfam Cyclin C-terminal domain 155 261 IPR031658 -
Trre10g03440 307 SMART cyclin_7 68 147 IPR013763 -
Trre10g03440 307 SUPERFAMILY Cyclin-like 155 281 IPR036915 -
Trre10g03440 307 MobiDBLite consensus disorder prediction 277 307 - -
Trre10g03440 307 CDD CYCLIN_AcCycH_rpt2 153 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03440 Trre-Chr10 44144062 44151400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03440 1 256 Core Cell Cycle Gene Families AT5G27620 58.214 1.01e-111 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03440 K06634 - gmx:547736 504.982