Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03437 ATGGCTGATTTTCAGACCTCTACCCACCGATCCAAGTGGATTTTCTCTCCTCAAAAACTGATCGAGAAATATACAGATGCTAATCAGAGAGCCAAGCAAACCCTAGAGCAGTGTGGAGCAACTCTAATGGAAGTAGATGATGATGGGTCTTTGTCATATCCGGAATCCCAGATGACTGCAAACAATAGTGCTGAAAAACATTCTCGGATAAAACCTCTTAGTATTGAAGAGGAGCAATGTATAAAGGTATTTTATGAAAACAAGCTACAAGAAGTGTGCAACAATTTCCACATAAGATCCAGGTATGCAAACTCTTCTATAGGTATTGCAACAGCCCTCGTATTTTTTAAAAGGTTCTATCTGCAATGGTCAGTGATGGAACATCAACCAAAAAATATAATGTTGACATGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTATCGGCTGAGGAGCTTGGTAAGGTGATTTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTACCAGAGTCTGGAATTTGATCTTATTGTTTATGCTCCATATCGCTCAGTTGAAGGTTTTACAGATTATATGGAGGAATTTTGCAATGCCGGTGAGGACGAGCTTCAAATGCTCAAGGCTTTGCAAAATACAGCAAGACTCGAAGTTGATAAAATGATGCTTACAGATGCACCACTCTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCACTACGTACCTCAAATGCTCTCCATAAAGTTCTTGACTTTGATAGTTTTCTGAGCAGAATTTTTTCCCGTCAGAATTCTACGCACACAATGGCCGACCTTCTTGAATCATTGGATGCAATTGAATCTTGGGTTAGAAAATATAGAAGTCCTTCAGAGAAGGAATTGAAGCATATCAACCGGAAACTGAAGTCTTGTTGGGGTCATAGTTCTCATGACGAGGGAAAGAAGAGGGAGAAGAAATCAAAGCACAAGTCCAGAAAGAGCTCAAACGAAGCACAAAATGCTTAG 1014 0.3974 MADFQTSTHRSKWIFSPQKLIEKYTDANQRAKQTLEQCGATLMEVDDDGSLSYPESQMTANNSAEKHSRIKPLSIEEEQCIKVFYENKLQEVCNNFHIRSRYANSSIGIATALVFFKRFYLQWSVMEHQPKNIMLTCIYAACKIEENHVSAEELGKVISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVEGFTDYMEEFCNAGEDELQMLKALQNTARLEVDKMMLTDAPLLFPPGQLALAALRTSNALHKVLDFDSFLSRIFSRQNSTHTMADLLESLDAIESWVRKYRSPSEKELKHINRKLKSCWGHSSHDEGKKREKKSKHKSRKSSNEAQNA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03437 337 SUPERFAMILY Cyclin-like 66 182 IPR036915 -
Trre10g03437 337 FunFam cyclin-H1-1 63 181 - -
Trre10g03437 337 Gene3D - 63 181 - -
Trre10g03437 337 Pfam Cyclin, N-terminal domain 109 180 IPR006671 -
Trre10g03437 337 SUPERFAMILY Cyclin-like 185 311 IPR036915 -
Trre10g03437 337 CDD CYCLIN_AcCycH_rpt2 183 310 - -
Trre10g03437 337 Gene3D - 183 288 - -
Trre10g03437 337 SMART cyclin_7 87 174 IPR013763 -
Trre10g03437 337 Pfam Cyclin C-terminal domain 185 291 IPR031658 -
Trre10g03437 337 MobiDBLite consensus disorder prediction 307 337 - -
Trre10g03437 337 FunFam Cyclin h 183 288 - -
Trre10g03437 337 CDD CYCLIN_AcCycH_rpt1 3 180 - -
Trre10g03437 337 PANTHER CYCLIN 77 331 IPR043198 GO:0006357|GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03437 Trre-Chr10 44144062 44151400 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03437 1 286 Core Cell Cycle Gene Families AT5G27620 60.140 2.51e-123 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03437 K06634 - gmx:547736 551.206