Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03432 ATGAAGGGCATAATTGCAAGGTATAATCAGCACTCCCAACAAATCAACAAATTGGATGAACCTTTGCAACTGCAGGCAGAGACAAGTGTGTCAGCTGAATTGCATAAGGAAGTTGCAGATAAAACTCAACAATTAAGGAGAATGAAAGGTGAAGATTTTGAAGGGTTAAATTTAGAAGGGCTGCAACAATTGGAGAAAAAACTTGAAATAGGACTCAAGCGTGTGATTCAGATGAAGGAAAAGAGGATTATGAATGAGATCGGCACACTTCAGATACAGGGTGCCAAGTTAGAAGAGGAGAACAAGCATTTAAAGCAAAAGATGGCTATGTTCTTTAAGGGAAAAAGTCCTATCTTGGGGGACTTGGATACTACCATGCAGGAAAATGTTTCATCAGAGTCCATGAATAATGTATGCAGCAGCAATAGTGGACCTTCTCTTGAACATGATTCTTCTGACACATCTCTTAAGTTAGGGTAA 480 0.3917 MKGIIARYNQHSQQINKLDEPLQLQAETSVSAELHKEVADKTQQLRRMKGEDFEGLNLEGLQQLEKKLEIGLKRVIQMKEKRIMNEIGTLQIQGAKLEEENKHLKQKMAMFFKGKSPILGDLDTTMQENVSSESMNNVCSSNSGPSLEHDSSDTSLKLG 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03432 159 Coils Coil 87 107 - -
Trre10g03432 159 ProSiteProfiles K-box domain profile. 24 114 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre10g03432 159 MobiDBLite consensus disorder prediction 128 159 - -
Trre10g03432 159 Pfam K-box region 31 108 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre10g03432 159 Coils Coil 31 51 - -
Trre10g03432 159 Coils Coil 61 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03432 Trre-Chr10 44062044 44065676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03432 1 159 MADS-box Gene Family AT4G24540 45.679 8.95e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03432 - - pop:7461823 174.096