Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g03430 ATGATTTCTCAACCAATCTTATTAGCTTTGATTCTATTCCTCCTTGCTTTCCTTCTCCAACATTTTTTGTTTAAAAGAAACAACAAATCAAAGGAGCATTTCCCTTACCCTCCAAGTCCACCAGCAATACCAATAATTGGCCATCTTCATCTAGTCAAACCACTCATTCATCAAGCCTTTCGAGATCTCTCCGATCGATATGGCCCTCTTATATCCCTTCGACTTGGCTCCGTTCAATTTATCGTTGTTAATACCCCATCACTCGCTAAAGAGTTTCTCAAAACAAACGAACTTGTTTATTCTTCGCGTAAAAAAAACATTGCCATCAACTTGGTTACCTATGATGACGCTACTTTTGCTTTTGCCCCTTATGGGACATATTGGAAATTCATTAAAAAGGTCAGCACCTTTGAGCTCTTAGGAAATCGAACCATCGGACAATTTTTACCAATTCGAACCCGAGAACTCCATGAATTCATTCAAACTTTGGCAAATAAATCCAAGGCCGAAGAGAGCGTGAACCTCACACAAGCTTTGTTGAAGTTATCCAACAATATAATATCACAGATGATGTTGAGCATTGAGACCTCAGGATCGGATAGTCAAGCAGAACAGGCGAGGACATTGGTTCGCGAGGTGACACAAACTTTCGGGGAATTTAACGTTTCAGATTTTATAGGATTTTGCAAGAAGATGGACTTACAAGGTCTCAAAAAGAGGGCATTGGATATACATAAGAGGTATGATGCCTTTTTAGAGAAACTCATATGTGATCGCGAGGAATCAAGAAGGAAAGTCAAGGTTGAGGGTGGTTTTGTGGATGAAGAGAAAGTGAAGGACTTTCTTGATATTTTGCTTGATGTTTCTGAGGCCAAAGATTGTGAAGTTAACTTTACTAGGAACCATATCAAATCATTGATCTTGGATTACTTTACAGCAGCTACAGACACTACTGCCATTTCATTGGAATGGGCAATAGCTGAATTGTACAACAATCCAATGGTGTTGAAGAAAGCGCAAGAGGAGGTGGAGAGAGTAATAGGGAAGGAAAGACTAGTATCTGAAACAGACATTTCAAATCTTCCTTATACAAATGCAGTCATAAAAGAAACATTAAGACTTCACCCGCCACTACCGATGATAGCTCGGAAAGGAACACAAGATTGTGTCATCGATGAGAAAATGATTCCAAAAGGCTCGATAGTTTGCGTGAACATTTGGGCCATGGGAAGGGACCCAAAGATCTGGAAAAGCCCATTGGAGTTTAAACCCGAAAGGTTTTTGGAATCTGGCATGGAGAGTGATATAGATATCAAAGGACATCACTTTGAATTGTTGCCATTTGGTTCGGGAAGGAGAGGTTGTCCAGGGATGCCTTTGGCTATGCGTCAATTGCCCACCGTAATTGGAGCTTTGATACAATGCTTTGAGTGGAAGATGCTTGATTCTGAAAACAAAATCTTAAATCAAGGCAAAACAATACATATGGAAGAGCGGCCAGGATTGACCGCTCCTCGAGCCAATGAACTTTTTTGCATTCCAGTTGCAAGATTGAATCACATTCCTTGTCTTTAA 1575 0.4025 MISQPILLALILFLLAFLLQHFLFKRNNKSKEHFPYPPSPPAIPIIGHLHLVKPLIHQAFRDLSDRYGPLISLRLGSVQFIVVNTPSLAKEFLKTNELVYSSRKKNIAINLVTYDDATFAFAPYGTYWKFIKKVSTFELLGNRTIGQFLPIRTRELHEFIQTLANKSKAEESVNLTQALLKLSNNIISQMMLSIETSGSDSQAEQARTLVREVTQTFGEFNVSDFIGFCKKMDLQGLKKRALDIHKRYDAFLEKLICDREESRRKVKVEGGFVDEEKVKDFLDILLDVSEAKDCEVNFTRNHIKSLILDYFTAATDTTAISLEWAIAELYNNPMVLKKAQEEVERVIGKERLVSETDISNLPYTNAVIKETLRLHPPLPMIARKGTQDCVIDEKMIPKGSIVCVNIWAMGRDPKIWKSPLEFKPERFLESGMESDIDIKGHHFELLPFGSGRRGCPGMPLAMRQLPTVIGALIQCFEWKMLDSENKILNQGKTIHMEERPGLTAPRANELFCIPVARLNHIPCL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g03430 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Trre10g03430 524 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PANTHER STEROID 21-HYDROXYLASE-RELATED 14 507 - -
Trre10g03430 524 Pfam Cytochrome P450 37 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 Gene3D Cytochrome P450 21 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g03430 524 FunFam Cytochrome P450 family protein 28 512 - -
Trre10g03430 524 SUPERFAMILY Cytochrome P450 37 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g03430 Trre-Chr10 44018357 44020696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g03430 28 517 Cytochrome P450 AT5G06900 41.057 1.97e-140 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g03430 K23179 - gmx:100783503 780.785